Fructilactobacillus cliffordii: M3M38_07120
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Entry
M3M38_07120 CDS
T08843
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
fcli
Fructilactobacillus cliffordii
Pathway
fcli03030
DNA replication
fcli03430
Mismatch repair
fcli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M3M38_07120 (holA)
03430 Mismatch repair
M3M38_07120 (holA)
03440 Homologous recombination
M3M38_07120 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fcli03032
]
M3M38_07120 (holA)
03400 DNA repair and recombination proteins [BR:
fcli03400
]
M3M38_07120 (holA)
Enzymes [BR:
fcli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M3M38_07120 (holA)
DNA replication proteins [BR:
fcli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M3M38_07120 (holA)
DNA repair and recombination proteins [BR:
fcli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M3M38_07120 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNApol3-delta_C
DNA_pol3_delt_C
nSTAND1
DNA_pol3_gamma3
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
USS86430
LinkDB
All DBs
Position
1410073..1411095
Genome browser
AA seq
340 aa
AA seq
DB search
MAISQIIEQISTAPQPLYLVIGRSDYWENQILSRLQQLIPTEERTMNFATYDLEETSLGD
ALNDAQSVPFFGDQRVVVIQNAAFLTGMKGKATGKQELDDLTAYLQNPSPATVLVVFAPY
EKLDNRKKVTKQLKKSATLIDLNAISERETTEFVRHFIQKQDYQIEPDAVSELFARTQGD
LTLIMNELQKLFLFCREQHVITVDAVNQLVAKSTTQNVFDLSDDLLAGKTNTAIEFYHEL
LMQREDPIKINALLESQFRLLLQVKILQQHGQSQAHMAQMLKVHPYRIKIASRMIARFSV
SYLEESFAALVEIEHKLKSSTVNPELLFEMFAIQFSQKNT
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcagtcagataattgaacaaattagtacggcaccgcaacctctgtatttggtg
attggtcggagtgactactgggagaatcaaattttatctcgacttcagcagttaattcca
acagaagaacggacgatgaattttgccacctatgatttggaggaaacgtcgttaggggac
gctttaaacgatgctcaatcggttccgttttttggtgaccaacgggtggttgtgattcaa
aatgccgcctttttgacgggcatgaaggggaaagcaactggtaagcaagaattagacgat
ctaactgcttatttgcaaaatccgtctcccgcgaccgtcttagtggtgtttgctccgtat
gaaaagttagataaccggaaaaaggttactaaacaactaaaaaagagcgcgacgttgatt
gatctaaatgcgatttcagagcgagaaacgacggagtttgtccgccactttattcaaaaa
caagattatcaaattgagccggatgcggtgtccgaactgtttgcgcgcacccagggagat
ctgacgttaattatgaacgagctgcagaagctgttcttattttgtcgggagcaacatgtg
attactgtggatgctgtcaatcagttggtagccaagtctacgacgcaaaatgtgtttgat
ttgtccgatgatctactcgccggcaaaactaataccgcaattgagttttatcatgaactg
ctgatgcaacgcgaagacccgattaagatcaatgcgcttttagagtcgcaatttcggttg
ttgttgcaggttaagattttacagcagcacggtcagagtcaagcacacatggcgcaaatg
ctaaaggttcacccgtaccgaatcaaaattgcgagtcgaatgattgcccgcttttccgtt
tcttacttagaagagtcctttgctgcgttagttgaaattgagcacaaactaaaaagcagc
actgtgaatcccgaactgctctttgaaatgtttgctattcaatttagtcaaaaaaacact
tag
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