KEGG   Flavobacterium commune: BIW12_00590
Entry
BIW12_00590       CDS       T05006                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
fcm  Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:fcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:fcm03016]
    BIW12_00590
Enzymes [BR:fcm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     BIW12_00590
Transfer RNA biogenesis [BR:fcm03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BIW12_00590
 Prokaryotic type
    BIW12_00590
SSDB
Motif
Pfam: Anti-Pycsar_Apyc1 Lactamase_B_2 Lactamase_B_4 Lactamase_B Cucumo_coat PDEase_II
Other DBs
NCBI-ProteinID: AOZ98051
UniProt: A0A1D9P666
LinkDB
Position
complement(169755..170660)
AA seq 301 aa
MKLTILGCYAATPRTITNPTAQILEIKNRLFLIDCGEGTQVQLRKNKIKFSKINQIFISH
LHGDHFYGLIGLISTFSLLNRNNDLHIYGPKGIKEIIMLQLRLSNSWPNFGLHFHELTSK
ESEVIYEDEKVLVKTIPLKHRIYTNGFLFQEKIDKRKLNIEAVQKYQIEKCYYQNIKNGK
DILLDNGTLIPNVQLTFDPEIPRSYAFCSDTAYNEAILLIIEKADVLYHEATFLQSEENL
AAKTMHSTAIEAATIAKKAQVKQLILGHYSTRYDNINLFKEEAETVFPAILLADDGVSFD
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaattaactattctaggctgttatgcagcaacacctcgcacaattaccaatcctact
gctcagattttagaaataaaaaacagattgtttcttattgattgtggggagggaacacaa
gtccaacttcggaaaaacaaaatcaagttttctaagattaaccaaattttcatttcgcat
ttgcatggagatcatttttatggtttaatcggtttaatttctactttttctttactaaat
cgcaataacgatttacatatttacggtcctaaagggattaaggaaatcataatgttgcaa
ttgcgattatccaattcctggcctaattttggtctgcattttcatgaattaacatcaaag
gaaagtgaagtgatttatgaggatgaaaaagttttggtgaaaaccataccattaaaacat
cgtatttataccaatggatttttatttcaggaaaaaatagataaaagaaaactgaacatt
gaagcggtccagaagtaccaaatcgagaaatgttattatcagaatataaaaaatggtaaa
gacattcttttggataatggaactctcattcctaatgtacaattgacatttgatcctgaa
attccccgaagttatgctttttgttcagatacagcttataatgaagctattttgttaata
atcgaaaaagccgacgttttgtaccacgaagctacttttttgcaatctgaggagaattta
gccgctaaaacaatgcattcaacagctatagaagcagctactattgctaaaaaagctcag
gtaaaacaacttattttaggtcattattctacccgatatgacaatatcaatttgtttaaa
gaagaagctgaaacggtttttcctgctattttattggcagatgatggcgtaagctttgat
ttatag

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