Flavobacterium commune: BIW12_00785
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Entry
BIW12_00785 CDS
T05006
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
fcm
Flavobacterium commune
Pathway
fcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BIW12_00785
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fcm01007
]
BIW12_00785
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcm03016
]
BIW12_00785
Enzymes [BR:
fcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BIW12_00785
Amino acid related enzymes [BR:
fcm01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BIW12_00785
Transfer RNA biogenesis [BR:
fcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BIW12_00785
Prokaryotic type
BIW12_00785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
AOZ98087
UniProt:
A0A1D9P670
LinkDB
All DBs
Position
211236..213656
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AA seq
806 aa
AA seq
DB search
MKISYNWLKQFIKTDWNSEQTAALLTDLGLEVEVVEKYQSVKGGLEGIVVGHVLTCVPHP
DADRLKVTTVDIGNGTPIQVVCGASNVAAGQKVPVATIGTVLYDKEGSSFTIKKGKIRGQ
ESHGMICAEDELGLGTGHDGIMVLDDALVPGTPAAKVFKIENDEVFEIGLTPNRADAMSH
LGTARDLRAGLLQNGVSVELITPSVSNFRVDMRTLKIDVKVDSPALAPRYCGVTISGITV
KPSPAWLQDRLKAIGINPKNNIVDVTNYVLHDLGQPLHAFDAAKINGKIHVKTVEAGTKF
TTLDDVERTLHEEDLMICDEKGPMCIAGVFGGQKSGVTDNTTSIFLESAYFNPVSVRKTA
KRHQLNTDASFRFERGIDPSITAYALKRAALLIQEVAGGQITSDLIDIYTKKVEDFSVFV
NFDKVNKIIGQQIPKDIIKKILASLDIKINSVSDAGLGLTIPAYRVDVQREIDVIEEILR
VYGYNKIDFSNKVNATVFNAPRNEDYKLQNIVGNQLNSQGFHEIMANSLTTSAYVQLSEM
LKEEHNVTMLNPLSNDLATMRQSLLFSGLEAIAYNINRKNADLRLFEFGKSYHKFLSGYE
EHKHLTLFLTGNRNQENWTNPQKPSDFFLFKGYVEGIFSRLGIQKIQNSPVKSDVFSEGI
AIGTTQNTLVEFGVVKKSILKHFGIKQEVFYADFNWEAILKTIPNKIKYTEITKYPEVRR
DLALLIDENVNYDSIYAIARQTEKSLLKDINLFDVYEGKNLPEGKKSYALSFILQDDSKT
LTDAQIDKIMGKLQKNFETELGASLR
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatcatacaactggttaaaacaattcattaaaaccgattggaattcagaacaa
acagcagcattactgactgatttaggtcttgaggtagaagttgttgaaaaatatcaatct
gtaaaaggaggattagaaggtattgtagtaggtcatgtacttacttgtgtaccacatcct
gatgccgacagactaaaagttacaactgttgacataggaaatggtactccaatacaggtt
gtatgtggagcttcgaatgtggcagcgggacaaaaagtacctgtagccactattggtact
gtattatatgataaagaaggaagttcatttaccataaaaaaaggaaaaatccgcggacag
gaaagccacggaatgatttgtgccgaagacgaattaggtcttggaactggtcatgacgga
attatggttttggatgatgccttagttcctggaactccggcagccaaagttttcaaaata
gaaaatgacgaagttttcgaaataggcttaacgccaaatcgcgccgatgccatgagtcat
ttaggtacagcgagagatttgagagccggattattacaaaacggggttagtgtcgaatta
attacgccatctgtaagtaattttagagtagacatgcgtactttaaagattgacgttaag
gttgattcacctgcattagcacctcgttattgtggagttaccatttcgggtattacggta
aaaccttcaccagcctggttacaagatcgtttaaaagctattgggatcaatccaaaaaac
aatattgtcgatgtaaccaattatgttttacatgatttaggacaacctttacacgctttt
gatgcagcaaaaatcaacggaaaaattcatgtaaaaacggtcgaagctggaacaaaattc
accactttagacgatgttgaaagaaccttacacgaagaagatttgatgatttgtgacgaa
aaaggtccaatgtgtattgcaggggtttttggtggtcaaaaatcgggagtgactgataat
acgacttctatcttcttagaaagtgcttattttaatcctgtaagcgttagaaaaacagcc
aaaagacatcaattaaataccgatgcctcttttagatttgaaagaggaatcgatcctagt
attacagcttatgccttaaaacgtgcggctttgttaatccaggaagttgccggaggtcaa
atcacttctgatcttatcgatatctacactaaaaaagtggaagatttctcagtatttgta
aattttgataaagtcaataaaattattggacaacaaatcccaaaagacattatcaaaaaa
atattagcatcattagatattaaaataaatagtgtttcggatgccggtttaggtttgact
attcctgcttaccgcgttgatgttcaaagggaaattgatgttattgaagaaatcctaaga
gtttacggttacaataaaattgatttttcgaataaagtaaacgctactgtttttaacgcg
ccaaggaacgaagattataagttgcaaaatatcgttggaaatcaattgaattcacaagga
ttccacgaaataatggctaattcattgactacgtctgcttatgttcaactttcagaaatg
ctaaaagaagaacacaatgtaacgatgttaaatccattgagtaatgatttggcaactatg
cgtcaatctttattattctcgggattagaagctattgcttacaacattaaccgtaaaaat
gccgatttaagattgtttgaatttggaaaatcataccataaattcctttccggctatgaa
gaacacaaacatcttactttgtttttaaccggaaacagaaaccaggaaaactggactaat
ccacaaaaaccttctgatttctttttattcaaaggttatgtagaaggaattttttcgaga
ttaggaattcaaaaaatacaaaacagccctgtaaaatcggatgttttctctgaaggaatt
gccattggaacaactcaaaatacgttggtagaatttggtgtagtaaaaaaatcaatccta
aaacacttcggaatcaaacaagaggttttttatgctgattttaattgggaagctatttta
aaaactattcctaacaaaattaaatatactgaaatcactaaatatcctgaggtaagaaga
gatttagccttactgattgatgaaaatgtaaactacgacagtatttacgcaattgccaga
caaacagagaaaagcctattgaaagacatcaacctttttgatgtttacgaaggtaaaaac
cttcctgaaggtaaaaaatcctacgctttaagcttcattcttcaagacgattcaaaaaca
cttaccgatgctcaaattgacaaaatcatgggcaaattgcaaaagaattttgaaacagaa
cttggagcaagtttgagataa
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