KEGG   Flavobacterium commune: BIW12_01640
Entry
BIW12_01640       CDS       T05006                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
fcm  Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:fcm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:fcm03032]
    BIW12_01640
   03036 Chromosome and associated proteins [BR:fcm03036]
    BIW12_01640
   03400 DNA repair and recombination proteins [BR:fcm03400]
    BIW12_01640
DNA replication proteins [BR:fcm03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    BIW12_01640
Chromosome and associated proteins [BR:fcm03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    BIW12_01640
DNA repair and recombination proteins [BR:fcm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      BIW12_01640
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: AOZ98243
UniProt: A0A1D9P6V2
LinkDB
Position
complement(403056..403328)
AA seq 90 aa
MNKSELIDAIAADAGITKAAAKLALESFLGNVGGTLKKGGKVSLVGFGSWSVSPRAARDG
RNPQTGKTIQIAAKNVVKFKAGAELEGAVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaatcagaattaatcgatgctatcgctgctgacgcaggaattactaaagctgct
gcaaaattagctttagaatcatttttaggtaatgtaggtggtaccttgaaaaaaggtgga
aaagtatctcttgtaggtttcggatcatggtcagtttctccaagagctgctagagacgga
agaaatcctcaaactggaaaaacaattcaaatcgctgctaaaaacgttgtgaaattcaaa
gctggagctgaattagaaggagctgtaaactaa

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