Flavobacterium commune: BIW12_02170
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Entry
BIW12_02170 CDS
T05006
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fcm
Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcm03016
]
BIW12_02170
Enzymes [BR:
fcm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BIW12_02170
Transfer RNA biogenesis [BR:
fcm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BIW12_02170
Prokaryotic type
BIW12_02170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AOZ98345
UniProt:
A0A1D9P891
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All DBs
Position
530455..531225
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AA seq
256 aa
AA seq
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MRYFIKLAYNGTPYHGWQIQPNAASVQETLNKAFSVLLSSEINLMGAGRTDTGVHAREMY
AHFDFEAAFDIPKLIHKLNSYLPKDIVIYQIFPVDSEAHCRFDATKRTYEYHINVFKDAF
SQEQSWYFHQELDVDLMNKAAKLLLNHTDFQCFSKVKTDVNTFDCTIFEAYWTRGGAEQS
EAKQEGNKLIFTISANRFLRNMVRSIVGTLINIGLHKITLADFNTIIESKSREKAGFSVP
AHGLYLTKIEYPYLDN
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttataaaattagcctataacggaacaccatatcatggttggcaaattcag
cctaatgccgcttcggtacaggaaacactgaataaagctttttcggttctattaagttcc
gagattaaccttatgggtgccggacgcacggataccggggttcatgcccgagaaatgtac
gctcattttgattttgaagcagcttttgacattccaaaattaattcacaaactcaattct
tatcttcctaaagatattgttatttatcaaattttccctgttgacagtgaagcacactgt
cgttttgatgcgactaaaagaacttatgaataccatatcaatgtttttaaagacgctttt
tcacaagaacaaagttggtatttccatcaagaattagatgttgatttgatgaataaagca
gcaaaactattacttaaccacaccgattttcaatgtttctctaaggtaaaaacagatgta
aacacatttgattgtactatttttgaagcttactggactcgaggcggagccgaacagagc
gaagctaaacaggaaggaaacaaactaatttttaccatttcagccaatcgatttttgaga
aatatggtacgctctatagttggaaccttgattaatattggtttacacaaaataacatta
gccgattttaatacaattatcgaaagtaaaagcagagaaaaagcgggattttcggtaccg
gctcacggattgtatttaactaaaattgaatatccttatttagacaattag
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