Flavobacterium commune: BIW12_02190
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Entry
BIW12_02190 CDS
T05006
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
fcm
Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fcm03009
]
BIW12_02190
Enzymes [BR:
fcm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
BIW12_02190
Ribosome biogenesis [BR:
fcm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BIW12_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
IrmA
Motif
Other DBs
NCBI-ProteinID:
AOZ98349
UniProt:
A0A1D9P735
LinkDB
All DBs
Position
complement(534428..535021)
Genome browser
AA seq
197 aa
AA seq
DB search
MSHHHFILHKPYGYLSQFIYELKRKKKLLGELHDFPEGTMAIGRLDEDSEGLLLLTTDGK
MSEYIRSRKVDKEYYVQVDGIITQTAIDEIKKGVEIGFNGTKYITKPCEARLIHKIPNFG
ARGKKIRDERHGPTSWASITVNEGKFRQVRKMTSAVGFPTLRLVRVRIGNVHLNNLQSGE
VIEVENFNSNDNNQITE
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcatcatcattttattcttcataaaccctatggttatttgagtcagtttatttac
gaattgaaacgaaaaaagaaattattaggggaattacatgattttcccgaagggacaatg
gctattgggcgattagacgaagactccgaaggtttattgttgttgactactgatggaaaa
atgagtgagtacattcgttcccgaaaagtcgataaagaatactatgttcaggtggatggt
atcattactcagacagctattgacgaaataaaaaaaggagtcgaaataggttttaatgga
actaaatacattacaaaaccctgcgaagccagattgattcacaaaatccctaattttggc
gcaagaggtaagaaaatccgtgatgaacgtcatggtcctacttcctgggcttcgataaca
gttaatgagggaaaatttcgtcaggtgcgaaaaatgacatcggctgttggttttcctact
ttgcgtttagtgcgtgtgcggattggcaatgtacatttgaacaatttgcaatcaggagaa
gtgattgaagttgaaaatttcaatagcaatgacaataatcaaataacagaataa
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