Flavobacterium commune: BIW12_03985
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Entry
BIW12_03985 CDS
T05006
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fcm
Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcm03400
]
BIW12_03985
DNA repair and recombination proteins [BR:
fcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
BIW12_03985
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
AAA
TrwB_AAD_bind
AAA_16
Zot
FtsK_SpoIIIE
ResIII
AAA_30
AAA_7
AAA_6
AAA_19
CbiA
RF-1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AOZ98659
UniProt:
A0A1D9P7X4
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All DBs
Position
921603..923129
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AA seq
508 aa
AA seq
DB search
MDKSKLFSEQINLGYQSKGQSIILGGAILEGETLENAHVKIPLKTLNRHGLIAGATGTGK
TKTIQVLSEQLSSFGIPVLMMDIKGDFSGIAKEGEEKSFITERHTKINIPYQTGSFPVEL
LSLSEQSGVRLRATVSEFGPVLFSRILDLNDTQAGVVAIIFKYCDDNKMPLLDLKDFKKV
INYITEEGKDEITENYGKISTSTTGIILRKIIELEQQGGELFFGEMSFDIDDLMRIDENG
KGYVNILRLTDIQDKPKLFSTFMLSLLAEIYQQMPEKGDADQPELIIFIDEAHLIFKEAS
KALLEQIETIVKLIRSKGIGIYFITQNPMDVPSGILAQLGLKIQHALRAFTANDRQAIKQ
TADNYPSSEFYNTSELLTSLGIGEALVTALSEKGTPTPLAATMLRAPMSRMDILTESEIQ
EINNKSKLVKKYSENIDRESAYEMLNKKITAIEDENAKKEEEQNETKQTQTSNQPSTSEV
VGKSVLKVLTSATFIRGAFGILSKFLKK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggataagagcaaactatttagcgaacaaatcaaccttggataccaatccaaagggcaa
agcatcatactgggcggagcaattttagaaggagaaaccttagaaaatgctcatgtaaaa
atccctttaaaaacattaaacagacacggactcattgccggagcaaccggaaccggtaaa
acaaagacgattcaagttctgtctgagcaattatcatcttttggaattcctgtgttaatg
atggatatcaagggagattttagcggtattgccaaagaaggagaagagaaatctttcatc
accgaaagacatactaaaatcaatatcccttatcaaaccggcagtttccccgtagagcta
ttaagtttatcagaacaaagtggcgttcgcttaagagcaactgtatctgaatttggtccg
gtcttattttcgcgaatattagatttaaacgacactcaagccggagtagttgccattata
ttcaaatattgtgatgacaacaaaatgccattactcgatttaaaagactttaaaaaagta
atcaattacattaccgaagaaggcaaagatgaaattaccgaaaactatggcaagatatca
acttcgaccacaggaattattctgagaaaaattattgaattagaacaacagggaggcgaa
ctgttttttggagaaatgtcttttgatattgatgatttaatgcgcattgatgaaaacggc
aaaggatacgtcaacattcttcgtttaaccgacattcaggacaaaccgaaactattctcg
actttcatgttgagtttattagccgaaatctaccagcaaatgcctgaaaaaggagatgcc
gaccaaccggaattaatcatttttattgatgaagcgcatttaattttcaaagaagccagc
aaagcacttttggaacaaatagaaaccattgtaaaactaatccgttctaaaggaattgga
atttatttcattacccaaaacccgatggatgttcctagcggaatattggctcaattgggt
ttaaaaattcaacatgccttgagagcttttaccgctaatgacagacaagccataaaacaa
accgcagataattacccaagctctgaattctataacaccagcgaactgttaacaagtctt
ggaattggagaagctctggtaacggcattgagcgaaaaaggaactcctactccattagct
gctacgatgcttcgggcaccaatgagcagaatggatatcctgaccgaaagtgaaattcag
gaaatcaacaataaatcgaagttggtaaaaaaatacagcgaaaacattgatcgtgaaagc
gcctacgaaatgctgaacaaaaaaattaccgctatcgaagacgaaaacgctaaaaaagaa
gaagagcaaaacgaaaccaaacaaacccaaacttctaaccaaccaagcacttcagaagta
gttggaaaatcggttttaaaagtacttaccagtgctacttttattcgtggtgcttttgga
attctttctaaattcttaaaaaaataa
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