Flavobacterium commune: BIW12_04665
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Entry
BIW12_04665 CDS
T05006
Name
(GenBank) hypothetical protein
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fcm
Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BIW12_04665
Enzymes [BR:
fcm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
BIW12_04665
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
APA00870
UniProt:
A0A1D9PE56
LinkDB
All DBs
Position
1097008..1098867
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AA seq
619 aa
AA seq
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MKNTWNKNLIIALVFQLSSSLLFSQKQMESLDRGLIAVKENGHFYVGWRVLGTDADNLAF
NLYRKSGTNAAVRVNDQPISGATNLIDDKANPAEENSWFVKTVSNGVEKEAKGSFSIPAN
SPDKNYLSIPLKGISGYTPNDCSTGDLDGDGRYDLIVHMTGKGADNSFTGLTDPPIFQAY
TLEGKFLWEINLGKNIREGAHYTQFMVYDLDGDGIAEFVCKTADGTTDSANNVVGDASKD
WRDTDQKSATFGKILQGPEYLTVFDGKTGKIINTVPYIPERGDIGKWGGKGGNGKNDRTG
NRVDRFTACVAYLDGVHPSVVMCRGYYGRIVMAAWDFKDKKLSSKWVFDSKDGNNPFSGM
GNHGLSVADVDNDGKDEIVYGSMVVDNDGKGLYTTGFRHGDALHVSDLDPEIPGQEVFGV
HEIEEGTKGPGVVLFSAANGKVLFTAAPNEDVGRGVADNIDPSRIGAQMWWSGSKGLYDI
KGNAIGEAPRAANFVIYWDGDASREILNSNYIDKYGKGRIFTAEGARSNNGTKSTPALSA
DILGDWREELILRSEDNSELRIYSTTIPTTIRQYTLMHDSQYRLAIAWQNVGYNQPPHTS
FYMGTGMKTAPKPNIKLVP
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacctggaataaaaacctaataatagcactggtctttcaactatccagttca
ttattattcagccaaaaacaaatggaatccctcgacagaggattgattgcagtaaaagaa
aacggtcatttttatgtaggctggagagttttaggtactgacgccgataatttggctttc
aatttgtatcgaaaaagcggaacaaacgcagcagttcgtgtaaacgaccaacctatttct
ggcgcaaccaatctgattgatgacaaagccaatcctgccgaagagaatagctggtttgta
aaaaccgttagcaacggagtcgaaaaagaagccaaaggaagtttcagcattccagccaat
agtcccgataaaaactatttatccattccgttaaaagggatatccggttatactcctaat
gattgttccacgggagatttagacggagacggacgttatgatttaattgttcacatgact
ggaaaaggagccgacaattcttttaccggattgaccgaccctccaatttttcaggcctat
actctggaaggtaaatttttatgggaaattaatttaggcaaaaacattcgcgaaggcgca
cattatactcaattcatggtttatgatttagacggagatggcatagccgaatttgtttgt
aaaactgccgacggcacaaccgatagtgccaataatgtggtaggagacgcctcaaaagac
tggagagataccgatcaaaagtcggctacttttggtaaaatactacaaggacctgaatac
ctgactgtttttgatggtaaaacgggaaaaataatcaatacagttccttacattcctgaa
agaggggatattggaaaatggggaggaaaaggcggaaacgggaaaaatgaccgaaccgga
aacagagtcgatcgttttacggcttgtgttgcctaccttgatggtgtacatccatctgtg
gtgatgtgccgaggttattatggccgaattgttatggcagcctgggattttaaggacaaa
aaactaagctcaaaatgggtttttgacagcaaagacgggaataatccgttctccggaatg
gggaatcacggactctcggttgccgatgtggataatgacggaaaagacgaaattgtctat
ggttcaatggttgttgacaacgatggaaaaggtttatacactaccggttttagacatggt
gatgcattacatgtaagcgatttagatcctgaaatccctggtcaggaagtttttggtgtt
cacgaaattgaagaaggtacaaaaggtccgggagtagttttattttcggctgctaatgga
aaagtactgtttactgccgctcctaatgaagacgtaggaagaggtgttgctgacaacatt
gaccctagcagaattggagcccaaatgtggtggtcaggttctaaaggtttatacgacatc
aaaggaaatgcaattggagaagcaccacgagcagctaattttgtaatttattgggatggt
gatgcttcaagagaaattctgaattccaattatattgacaaatatggaaaaggtagaatt
ttcactgccgaaggtgcccgttctaacaatggaactaaatctactcctgccctttcagct
gatattttaggcgattggagagaagagttgattttaagaagtgaggacaacagcgaatta
cgaatttattccactacaattccaacgactatcagacaatacaccttaatgcacgattcc
caatatcgtttagccattgcctggcaaaatgtaggctacaaccagccgccacataccagt
ttttatatgggaaccggcatgaaaaccgctccaaaaccaaatattaaattggttccttaa
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