Flavobacterium commune: BIW12_04915
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Entry
BIW12_04915 CDS
T05006
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
fcm
Flavobacterium commune
Pathway
fcm00300
Lysine biosynthesis
fcm00470
D-Amino acid metabolism
fcm00550
Peptidoglycan biosynthesis
fcm01100
Metabolic pathways
fcm01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BIW12_04915
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BIW12_04915
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BIW12_04915
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
BIW12_04915
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fcm01011
]
BIW12_04915
Enzymes [BR:
fcm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
BIW12_04915
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
BIW12_04915
Peptidoglycan biosynthesis and degradation proteins [BR:
fcm01011
]
Precursor biosynthesis
Amino acid ligase
BIW12_04915
Racemase
BIW12_04915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
DUF6389
Motif
Other DBs
NCBI-ProteinID:
AOZ98826
UniProt:
A0A1D9P8D6
LinkDB
All DBs
Position
complement(1166074..1168518)
Genome browser
AA seq
814 aa
AA seq
DB search
MSIIIKNSIPILDAKWFGNHPEAIIDNISIDSRSLQNSEHTLFFALVGPNNDAHHYIKDL
IAIGVQNFVVTHIPEECNDQANFLVVKNTLVALQRFAAYYRSLFHFPIIGLTGSNGKTIV
KEWLNFLLSPDYNVIRSPKSYNSQVGVPLSVIAINEKHNLGIFEAGISTVAEMDKLEKII
KPTLGVLTNIGSSHDEGFADLEEKIQQKMLLFQDAAVLIYQKNSQIEKYISPNTKAFSWS
FKEENADVFVFHKEIGNHETTLSYKYKDNSYQLKIPFVDKASIENAISSLMVLLYFDYES
DVIQSRMEMLFPVEMRLEVKNGINNCSIIDDSYSSDFQSLKIALDVLESQNQFQKKTVIL
SDIFQSGFPNEQLYAKVAQLIVSNKINRVIGIGETISEFKEQFSNCITFKTTAEFISNFE
KLDFSNESILIKGARSFQFEEIVTLLEEKTHETVLEINLNAISYNLNFFKSKLKPKVKIM
VMVKAFGYGNGGLEIAKLLEHHKVDYLGVAFADEGISLKNGGIKLPIMVLNPESTSFSAI
IQYGLEPEIYSLKGLHAFLKIAKQKNLHHFPIHIKVDTGMHRLGFEEDTVDELIATLKGN
STVKVQSILSHMATSDDPNHYEFAQSQIRLFDSLSSKIISELGINPIRHILNTSGISNFP
DTQFDMVRLGIGLYGVSNDAEEQKQLENVGTLKSIISQVRNIPAGDSVGYGRRFMADKHT
KVATIPIGYADGISRAWGNGVGFVNIKEQKAIILGSVCMDMLMVDVSNIDCIEGDEVIIF
GENPSVSFIAEKLNTIPYEILTSISQRVKRVFYR
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgagtataataataaaaaacagtattccaattctggatgcaaaatggtttggaaaccat
cccgaagcaataatagataatatttcgattgatagccgctccttgcaaaatagcgaacat
acactgttttttgctttggtagggcctaataatgatgcgcatcattatatcaaggattta
attgctatcggggtacaaaattttgttgtgactcatattcctgaagaatgtaacgatcag
gctaactttttagtggttaaaaatacgcttgttgcgcttcagcgatttgcggcatactac
cgcagtctttttcattttcctattatcggtttaacgggtagcaacggaaaaaccattgtc
aaagaatggcttaattttctgttgagtccggattataatgtaatccgaagtcctaaaagt
tacaattcgcaagtgggcgtacccttgtcagtaattgccattaatgaaaaacacaatctg
gggatttttgaagcgggtatttctaccgttgctgaaatggataagttagaaaaaataatc
aaaccgactcttggtgttttgaccaatattggttcttcccacgacgaaggttttgccgat
ttagaagaaaaaatccaacaaaaaatgcttttgtttcaagatgctgccgttttgatttat
caaaaaaacagtcagattgaaaagtatataagtcctaatacaaaagcattttcgtggagt
tttaaagaagagaatgccgatgtttttgtgtttcacaaagagattggaaatcatgaaacc
acattgtcttataaatacaaagacaactcttatcagttaaagatcccttttgtggataag
gcttctatagaaaatgccatttcgagtttgatggtgttgttgtattttgattatgaaagt
gatgttatccagtcgagaatggaaatgctttttccggtcgaaatgcgtttggaagtaaaa
aacggaatcaataattgcagtattattgatgatagttacagttcggattttcagtctttg
aagattgccttggatgttttggaaagtcagaatcaatttcaaaagaagacggtaattctt
tcggatatttttcaaagtggttttcctaatgaacaattgtatgctaaggtagcccagttg
attgtttccaataaaatcaatcgcgtaatcggaattggggaaactatttcggagtttaaa
gagcaattttcgaattgtattacgtttaaaactacggctgagtttatttcgaattttgaa
aaactggatttttccaatgaaagcattttgataaaaggagcgcgttcgtttcagtttgaa
gaaatcgtgactttgcttgaagagaaaacccatgaaacggttttggaaatcaacctgaat
gcgattagttataatctgaatttttttaaatcgaagctaaaacctaaggtgaaaatcatg
gtgatggtaaaggcttttggttatggaaacggcggactcgaaatagccaaattactggaa
catcacaaagtagattatctgggtgtggcttttgctgatgagggaatttcgttaaaaaac
ggcggaatcaaattgcctattatggttttgaatccggagagtaccagtttttcggccatt
attcagtacggtttagaacccgaaatttacagtttgaaaggcttgcatgcttttcttaaa
atagcaaagcaaaaaaatctgcatcattttcctatccatatcaaagtggataccggcatg
caccgtctgggatttgaggaagatacggtcgatgagttgattgcaactttaaaaggaaat
tcgaccgtaaaagtgcaaagtattttgtcgcacatggctaccagcgatgatcccaatcat
tatgagtttgcacaatcgcaaatacgtttgtttgacagcctgtcttcaaagataatttcc
gaattaggaataaatcctattcgtcatattttgaatacttcggggattagtaattttcct
gacacacaatttgatatggttcgtttaggaatcggtttgtacggtgtttctaatgatgcc
gaagagcaaaaacagttagaaaatgtagggactctaaaatctattatttctcaggttaga
aatattcccgccggagacagtgtgggttatggccggcgttttatggccgataaacataca
aaggtagctacgattcctattggttatgccgatggaatttcgcgcgcctggggtaatggt
gtgggttttgtaaatatcaaagaacaaaaagcaattattctgggcagtgtttgtatggat
atgctgatggtggatgtaagcaatattgattgtatcgaaggcgatgaggtaattatcttt
ggtgaaaatcctagtgtttcgttcatagccgaaaaattaaataccattccgtatgaaatc
ttaacgagtatttctcaacgagttaagcgcgttttttatcgttaa
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