Flavobacterium commune: BIW12_05560
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Entry
BIW12_05560 CDS
T05006
Name
(GenBank) glycine--tRNA ligase
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
fcm
Flavobacterium commune
Pathway
fcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BIW12_05560
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fcm01007
]
BIW12_05560
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcm03016
]
BIW12_05560
03029 Mitochondrial biogenesis [BR:
fcm03029
]
BIW12_05560
Enzymes [BR:
fcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
BIW12_05560
Amino acid related enzymes [BR:
fcm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
BIW12_05560
Transfer RNA biogenesis [BR:
fcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BIW12_05560
Mitochondrial biogenesis [BR:
fcm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
BIW12_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AOZ98941
UniProt:
A0A1D9P8N5
LinkDB
All DBs
Position
complement(1338055..1339596)
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AA seq
513 aa
AA seq
DB search
MAKQEDIFKNVVSHAKEYGFIFPSSEVYDGLSAVYDYAQNGVELKKNIREYWWKAMVQMN
DNIVGLDAAILMHPTTWKASGHVDAFNDPLIDNKDSKKRYRADVLIEDYAEKLNQKAIKE
IEKARVRFGDAFNEAEFVSTNTRVVEYKAKEREILERMARSLGNEDLADVKALIEELEIA
CPESGSRNWTEVKQFNLMFGTKLGASADSAMDLYLRPETAQGIFVNFLNVQKSGRMKVPF
GIAQTGKAFRNEIVARQFIFRMREFEQMEMQFFVRPGEEMKHYEFWKEARLKWHLSLGLG
RENYRFHDHEKLAHYANAAADIEFNFPFGFKELEGIHSRTDFDLKAHEQYSGRKLQYFDP
ELNENYVPYVVETSVGLDRMFLAVFATSLKEETLEDGSTRTVLKLPAVLAPTKAAVLPLV
KKDGLPEIAHQIIADLKWDFNVAYDEKDAVGRRYRRQDALGTPFCITVDHQTVEDQTVTI
RHRDTMKQDRVKIADLKSIIENEVSMRNWLMKM
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacaagaagatatttttaagaatgtagtttcgcatgcaaaggagtacggattt
atttttccgtcaagcgaagtttacgatggtttaagtgcagtttatgattatgcacaaaac
ggagttgagttaaaaaagaacatccgcgagtattggtggaaagcaatggttcaaatgaac
gataatattgtaggacttgatgctgcaatattaatgcacccaactacatggaaagcttca
ggacacgtagatgcttttaacgatccattgattgataataaagattcgaaaaaacgatat
agagccgatgttttaattgaagattatgccgaaaagctaaatcaaaaagcaattaaagaa
atcgaaaaagcaagagttcgttttggagatgctttcaacgaggctgaatttgtttcgaca
aataccagagtggttgaatataaggctaaagaaagagaaattctggaaagaatggctcgt
tctcttggaaatgaagatttggctgatgtaaaagctttaatcgaggagttggaaattgct
tgcccggaatcaggttccagaaactggactgaagtaaagcagttcaatttgatgtttggt
actaaattaggtgcttctgctgattcggcgatggatttgtatttgcgtccggaaacagct
cagggaatttttgtgaattttctgaatgttcaaaaatcaggaagaatgaaagttcctttt
ggaattgctcagacaggtaaagcatttagaaatgaaatcgttgccagacaattcattttc
cgtatgcgtgaatttgaacaaatggaaatgcaattttttgtacgtccgggagaagaaatg
aagcattatgaattctggaaagaagctcgtttaaaatggcatttgtccttaggtttagga
agagagaattaccgtttccatgatcatgaaaaattggctcactatgccaatgcggcagct
gatatcgaatttaatttcccatttggattcaaagaattggaaggaattcactcgcgtact
gattttgatttaaaagcacacgaacaatattcaggaagaaaattacaatattttgatcct
gaactgaatgaaaattacgttccttatgtggtggaaacttctgtgggattagacagaatg
tttcttgcagtttttgctacttctttaaaggaagaaactttggaagatggttcgacaaga
acagtgttgaaattgcctgcagttttggctccaactaaagctgctgtattaccattagtt
aaaaaagacggattgccggaaattgcacatcaaattattgccgatttgaaatgggatttc
aacgtggcttatgatgagaaagatgcagttggtcgtcgttacagaagacaagatgcgtta
ggtactccattttgtattacagtagatcatcaaactgtagaagatcaaacggtgactatt
cgtcatagagatacaatgaaacaagatcgtgttaaaatagccgatttaaaatcgattatt
gaaaatgaagtttcgatgagaaactggttgatgaaaatgtaa
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