Flavobacterium commune: BIW12_07295
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Entry
BIW12_07295 CDS
T05006
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fcm
Flavobacterium commune
Pathway
fcm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BIW12_07295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcm03400
]
BIW12_07295
DNA repair and recombination proteins [BR:
fcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BIW12_07295
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BIW12_07295
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
DUF5717
Motif
Other DBs
NCBI-ProteinID:
AOZ99262
UniProt:
A0A1D9P9Q7
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Position
1748468..1749181
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AA seq
237 aa
AA seq
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MQIKTKAIVISALKYQEKSLIVKCFTLSHGLKSYFVRDAFSSRKTSQKMAYFQPMTILEI
EANHKNKGTLEHFKEIKIAEPFQSIHSDIYKSTIVLFLSEILHHSIHEEEKNETLFTFLE
TALHWLDEHDEMANFHLMLMLEMTKYLGFYPDTSDMDMPFFEMNEGVFTPFHAIGSLSEH
ETQLFKKLISLKFDNDQKVFHVIERQLLLKILIDYYAYHLDGFKRPKSLDVLKEVFS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattaaaaccaaggcaattgttatttcggctttaaaataccaggaaaaaagtctg
atagtaaaatgttttacgttgtcgcatggattgaaatcttattttgttcgagatgctttt
tcgagtagaaaaaccagtcaaaaaatggcttattttcagccgatgactattctggaaatc
gaagccaatcacaagaacaaagggactttagagcattttaaggaaattaaaattgcagag
ccatttcagtcgatacattctgatatttacaagagtaccattgtgctgtttctttcggaa
attttgcatcattccattcatgaagaagaaaaaaatgagacgctttttacttttttggaa
actgccttgcattggttagacgaacacgatgaaatggctaattttcatttgatgctaatg
ctcgaaatgaccaaatacctgggtttttatcccgatacttccgatatggatatgcctttt
ttcgaaatgaacgaaggtgtttttactccctttcatgccattggttctttaagtgagcat
gaaacccaattgttcaaaaaactcatttctttaaaattcgataacgaccaaaaagtgttt
catgttatcgaaagacaactgcttttaaaaattctgattgactattacgcctatcattta
gatggttttaaaagaccaaaatcgcttgatgttttaaaggaggttttttcttga
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