Flavobacterium commune: BIW12_07835
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Entry
BIW12_07835 CDS
T05006
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fcm
Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcm03016
]
BIW12_07835
Enzymes [BR:
fcm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BIW12_07835
Transfer RNA biogenesis [BR:
fcm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BIW12_07835
Prokaryotic type
BIW12_07835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AOZ99360
UniProt:
A0A1D9P9T6
LinkDB
All DBs
Position
complement(1882995..1883696)
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AA seq
233 aa
AA seq
DB search
MKPEEYLEGQVLLIDKPLKWSSFQAVNKLKYLLINKVGLPKKFKIGHAGTLDPLATGLLL
ICTGKFTKKIAELQGQAKEYTGTFYIGATTPSYDLETEIDETFPTEHINEALIYETVKHF
LGEIDQKPPIFSAIKKDGKRLYEHARAGEEVEIASRKTTILEFEITRIALPEIDFRVVCS
KGTYIRSLAYDFGKAMNSGSHLTALRRTKIGDYDVKNAIGVTLFEESLGLDSE
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgaagaatatttagaaggacaggttttactgatagacaaacccttgaaatgg
agctcatttcaggcggtgaataaattaaaatacctactcatcaacaaagtaggattacct
aaaaaattcaaaattggtcatgccggaactctcgatccattggcaaccggattgctgtta
atttgcaccggaaaattcactaagaaaatagcagaacttcagggtcaagccaaagaatac
accggtactttttatattggagccactactccatcctatgatttagaaaccgaaattgac
gaaacttttccaacggaacatattaatgaagccttaatttacgaaacagtgaaacatttt
ttgggcgaaattgatcaaaaaccaccaattttttctgcaataaaaaaagatggtaaacgc
ttgtacgaacacgctcgtgccggagaagaggtagaaattgcaagcagaaaaacgaccatt
ctcgaatttgaaatcacccgaattgcactgcctgaaatcgatttcagagtagtttgcagc
aaaggaacttacatccgttctttggcttatgattttggaaaagccatgaattcaggttca
cacttgacggcattacgtcgaacaaaaattggtgattatgacgtgaaaaacgctattggt
gttacgctgtttgaagagtctttgggattggattctgaataa
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