Flavobacterium commune: BIW12_08450
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Entry
BIW12_08450 CDS
T05006
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
fcm
Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcm03021
]
BIW12_08450
03009 Ribosome biogenesis [BR:
fcm03009
]
BIW12_08450
Transcription machinery [BR:
fcm03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
BIW12_08450
Ribosome biogenesis [BR:
fcm03009
]
Prokaryotic type
rRNA transcription factors
BIW12_08450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_NusA_C
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AOZ99472
UniProt:
A0A1D9PAC2
LinkDB
All DBs
Position
2030485..2031738
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AA seq
417 aa
AA seq
DB search
MENLALIDSFSEFKDDKLIDRVTLMAILEDVFRNALKKKYGSDDNFDIIINPDKGDMEIW
RRRVIVADEDLDFENEEITLTEARKIEADFEIGEEVSEEVKLIDLGRRAILALRQNLISK
IHEHDNTNLYKQFKDLIGDIYTAEVHHVRPRVVILVDDEGNEIVLPKEKQIPSDFFRKGD
NVRGIIESVELKGNKPQIIMSRTSEKFLEKLFEQEIPEVFDGLIMIKKVVRIPGEKAKVA
VDSYDDRIDPVGACVGMKGSRIHGIVRELGNENIDVINYTNNIQLFITRALSPAKVSSIK
INEEAKRAEVFLKLEEVSKAIGRGGHNIKLAGLLTGYELDVIREGDVEGTTADEDDVELT
EFSDEIDEWIIEEFAKIGLDTAKSILKHDVEDLVRRTDLEEETILDVMKILKEEFDS
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatttagcattaatcgattcattttcagagtttaaagatgataaacttattgat
cgtgtaacgcttatggcaattttagaagatgtatttagaaatgcattgaagaaaaaatac
ggttcagatgataatttcgatatcattatcaatcctgataaaggagatatggaaatttgg
agaagaagagtaattgttgctgatgaagatttagatttcgaaaatgaagagattacttta
accgaggctagaaaaatcgaagctgattttgaaattggagaagaagtttctgaagaggta
aaattgattgatttaggaagaagagctattttggctttgcgtcaaaatttgatttctaaa
attcatgaacacgataatacaaatctttataagcaatttaaagatttaataggtgatata
tacaccgccgaagtacaccatgtaagaccaagagttgttattcttgttgatgatgaagga
aatgaaattgttttgccaaaagaaaaacaaattccatcagattttttccgtaaaggagat
aacgttcgcggaattattgaaagcgttgaattaaaaggaaataaacctcaaattattatg
tccagaacttctgagaagttcttggaaaaattatttgaacaggaaattccggaagttttt
gacggtttaatcatgatcaaaaaagtagtgagaattccgggtgaaaaagcaaaagtagcg
gtggattcttatgatgacagaattgacccggtaggggcttgtgtggggatgaaaggttct
cgtattcacggaattgtacgtgagttaggtaatgaaaacattgatgttattaattatact
aataatattcaactgtttattacaagagcattgagtcctgcaaaggtttcttcgattaaa
atcaatgaagaagctaaaagagctgaggtattcctgaaattagaagaggtttcaaaagca
attggtagaggaggacacaacattaaattagccggtttattaacgggttatgagttggat
gttatcagagaaggagatgttgaaggaactacagcagatgaagatgatgttgaattaaca
gagttttcagatgaaatagacgagtggattatcgaagaatttgcaaaaattggattagat
actgctaaaagtatattgaaacatgatgtagaagatttagtaagaagaacagatttagag
gaggaaacaattctggatgtaatgaaaatattgaaagaagagttcgatagttag
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