Flavobacterium commune: BIW12_10225
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Entry
BIW12_10225 CDS
T05006
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
fcm
Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fcm02000
]
BIW12_10225
Transporters [BR:
fcm02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BIW12_10225
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
AOZ99784
UniProt:
A0A1D9PBS5
LinkDB
All DBs
Position
2427520..2429316
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AA seq
598 aa
AA seq
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MKKVLLYISIITVGFLSSCNSDDFLDAPAKSTLDESVIFSNAGLAKGAVDGIKVPFGETN
SYRGRFLPWYGLNTDVEWFNTSQTINANSELCNYNTKWDNTNMNTTNNAWAMMYSGIERA
NICIRGLRTYGNPQPGTELGYLLGESLALRAVYYADLLKAWGDIPARFEPITSATIYIPK
SSRDVIYKQLIQDLGEAADLVPWPNGSAATSSVHRINKAFVKALRARLAMAASGLQQYPD
GIRRSNDADLTVDKMYKLALDECRDVINSGTARLETSFETLWRKYNQEDVTAGGESLWQI
PFADGRGRMLFTFAVRHNSIDQFQANGNNRGGAAGPLPFVFYDYNQADTRRDVTCVPYKY
GTAVSGVSKQELNDLDTWYFGKYRYEWMSRYVTSTNDDGVDKLYMRYAEVLLIAAEAANE
LEGPSAAAPYLKEIRKRAFPSASHATMVDAYVNALASKEAMFNAIVDEHKFEFTGEMERK
QALIRWNLLKTKLDEAKVKMTNLQARTGEYADVPSTLYFKTAADNVSLEIYGLNRGETTN
PGVGYTAKSWLKLEPLKISTLYDATINPDTRQFWPIWQVFITGSNKQLVNDYGYGNEN
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagtacttttatatatatcaataattacagttggctttttaagttcatgtaat
tcagatgattttttagatgctcccgcaaaatcaactttagatgagtcggttatcttttct
aatgcaggtttggctaaaggagctgtagacggaattaaagttccatttggagaaacgaac
tcttaccgtggacgttttttaccatggtacggtttgaatacggatgtggagtggtttaac
acttctcaaaccataaatgccaattcagaattgtgtaattacaacacaaaatgggataat
accaatatgaatacgactaacaatgcctgggctatgatgtattcaggtattgaacgtgct
aatatttgtatccgtggtttgcgtacctatgggaatccgcaaccgggaactgaattgggt
tatcttttaggagaatctttggcgttgagagcggtatattatgctgatttgttaaaagcc
tggggagatattcctgcacgttttgagccgataacttccgcaacaatatatatccctaaa
tcaagtcgtgatgtgatttataaacaacttattcaggacttaggagaggctgctgattta
gtgccctggcctaatggaagtgcagctacttccagtgtacaccgaattaataaagctttt
gtgaaagcattacgcgcccgtttagcaatggcagccagcggattgcagcaatatcctgat
ggaataagaagaagtaatgatgcagatcttacggttgacaaaatgtacaaactggctttg
gatgaatgtagagatgtaatcaacagtggtacggcacgtttagaaacttcttttgaaacc
ttatggagaaaatacaatcaggaagatgtaactgccggaggcgaatcattatggcaaatt
ccttttgctgatggtcgtggacgtatgttgtttacttttgcagttcgtcataatagtatt
gatcaatttcaggcaaatggtaataatagaggaggagctgcaggaccattaccttttgta
ttctatgactacaatcaggccgatacccgtagagatgtgacctgtgtgccttataaatat
ggtacagcggttagtggtgtttctaagcaggaattgaatgatttggatacctggtatttt
ggaaaataccgttacgaatggatgtctcgttatgttacttcaactaatgatgatggagta
gataaattgtatatgcgttatgccgaagtgcttttaatagctgccgaagcggctaacgaa
ttagaagggccttcagctgctgctccctatttaaaagaaattagaaaaagagctttccca
tcggcatcacatgcaaccatggtagatgcttatgtaaatgctttggcgtctaaagaggcg
atgtttaatgctattgtggatgaacataaatttgagttcaccggagaaatggagcgtaaa
caagctttaattcgttggaatttattgaaaacaaaattagacgaagctaaggtgaaaatg
acaaaccttcaggctcgtactggcgaatatgccgatgtaccttcaactttatattttaaa
accgcagctgataatgtttcattggaaatttacggattaaaccgtggagaaactaccaat
cccggtgtaggatatactgcaaaaagctggcttaagttagagccacttaaaatcagtaca
ctatatgatgctactattaatccggatacaagacaattctggcctatttggcaagtcttt
attactggtagtaacaaacaattagtaaatgattacggatacggaaatgaaaattaa
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