Flavobacterium commune: BIW12_11180
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Entry
BIW12_11180 CDS
T05006
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
fcm
Flavobacterium commune
Pathway
fcm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BIW12_11180
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fcm01007
]
BIW12_11180
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fcm03016
]
BIW12_11180
Enzymes [BR:
fcm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
BIW12_11180
Amino acid related enzymes [BR:
fcm01007
]
Aminoacyl-tRNA synthetase
Class II (A)
BIW12_11180
Transfer RNA biogenesis [BR:
fcm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BIW12_11180
Prokaryotic type
BIW12_11180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
AOZ99943
UniProt:
A0A1D9PBJ8
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All DBs
Position
2664917..2666287
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AA seq
456 aa
AA seq
DB search
MASKPSIPKGTRDFSPAEVAKRQYIIQTIKSNFEKFGFQPIETPSFENSETLMGKYGEEG
DRLIFKILNSGDYLAKANAAYLENKDSVKLTSSISEKALRYDLTVPFARYVVQHQNEIEF
PFKRYQIQPVWRADRPQKGRFREFFQCDADVVGSKSLWQEVELVQLYDTVFTTLGLNGVT
VKINNRKILSGIAEVIGASDKLIDFTVALDKLDKIGEDGVKKEMIEKGISEEAIVKVQPL
FNFTGSISEKIEKLSQLLAASEEGMKGVEELRFICDNVTKLGLTTAILDLDVTLARGLNY
YTGAIFEVAAPKGVAMGSIGGGGRYDDLTGIFGLKNMSGVGISFGLDRIYLVIEELGLFP
ETVTASSKALFVNYGDAEAFYALQAIKKLRASGIKVELYPDKAKVAKQFQHADKRNIPFA
VIVGGEEMSSNTFSLKNLVSGEQITMDFESLKNALI
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaaaccaagtattcctaaaggaacaagagatttttcacctgctgaggtggct
aaacgtcaatatattattcagactataaaaagtaattttgaaaaatttggtttccaaccg
atagaaaccccttcgtttgaaaattcagaaaccctgatggggaaatatggagaagaaggc
gatcgattgatttttaaaatattgaattccggagattatttggcgaaagccaatgctgct
tatttagaaaataaagacagcgtaaagttaacttcaagtatttctgaaaaagctttgcgt
tatgatttgacggtgccttttgcaagatatgtggtgcaacatcaaaacgaaattgaattt
ccttttaaaagataccaaatccaaccggtttggcgtgccgacagaccgcaaaaaggacgt
tttagagaattttttcaatgtgatgccgatgtggtaggttcaaaatcattgtggcaggaa
gtggaattggtacaattatatgatacagttttcactactttaggtttaaacggagtgaca
gttaaaatcaataaccgaaaaatattatctggaattgctgaggtaattggtgcttcggat
aaattaatcgattttacggtggctctagataagttggataaaattggcgaagacggtgta
aaaaaggaaatgattgaaaaaggaatttctgaggaggcaattgtaaaagtgcagcctttg
tttaattttaccggaagtatttctgaaaaaatcgaaaaattatcacagcttttagccgct
tcggaagaaggaatgaaaggagtggaggagttgcgttttatttgtgacaacgtgactaaa
ttaggcttgacaactgccattttagatttggatgtgactttggcacgtggtttaaattat
tatacaggagctatttttgaagtagctgcgccaaaaggagttgctatgggttctattggt
ggcggtggtaggtacgatgatttgactggaattttcggtttaaaaaacatgagtggtgtg
ggaatctcttttggtttggatcgtatttatttggtaattgaggaattaggattgtttccg
gaaaccgttacggcaagttcaaaggctttgtttgtgaattatggagatgctgaagctttt
tatgctttacaagccattaaaaaattaagagcttcaggtataaaagtagagttgtatcct
gataaagctaaggtggccaaacaatttcagcatgctgataaacgcaatattccttttgca
gtaattgtaggaggagaagaaatgagttcgaatactttttcgcttaagaatttggtttct
ggagagcaaataacgatggattttgaatcgttaaagaatgctttgatttaa
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