KEGG   Flavobacterium commune: BIW12_11575
Entry
BIW12_11575       CDS       T05006                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
fcm  Flavobacterium commune
Pathway
fcm02024  Quorum sensing
fcm03060  Protein export
fcm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:fcm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    BIW12_11575
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BIW12_11575
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    BIW12_11575
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:fcm02044]
    BIW12_11575
Enzymes [BR:fcm01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     BIW12_11575
Secretion system [BR:fcm02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   BIW12_11575
  Eukaryotic Sec-SRP protein
   BIW12_11575
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin AAA_22 CLP1_P nSTAND3 cobW AAA_17 CbiA AAA_33 APS_kinase DUF5693 AAA_24 KTI12 ATPase KAP_NTPase 6PF2K NPHP3_N TsaE AAA_18 AAA_31 ATP_bind_1 NACHT DO-GTPase1 AAA_16 ArsA_ATPase SLFN-g3_helicase CPT AAA_14 GET2
Other DBs
NCBI-ProteinID: APA00019
UniProt: A0A1D9PBQ9
LinkDB
Position
2755153..2756511
AA seq 452 aa
MFDNLSEKLDKAFHILKGHGKITEVNVADTLKEVRRALLDADVNFKIAKDFTARVKDKAI
GQDVLTTLQPGQLLVKLVKDELTELMGGDVAGVNLQGTPSVILMSGLQGSGKTTFSGKLA
NYLQTKKNKKPLLVACDIYRPAAINQLHVVGDSIGVEVYSEPENKNPVEIAQNAIKHAKA
NGFNVVIVDTAGRLAVDQEMMDEIARVHDAIKPQETLFVVDSMTGQDAVNTAKAFNDILN
FDGVILTKLDGDTRGGAALSIKSVVNKPIKFVGTGEKMEAIDVFYPDRMAERILGMGDVV
SLVERAQEQFNEEEARKLQKKIAKNEFGFDDFLTQIQQVKKMGNMKDLVGMIPGASKAMK
DVEIEDDAFKHIEAIIYSMTPLERKKPALIDVKRKARIAKGSGTKVEQINQLMKQFDQMS
KMMKMMQGPGGKNLMKMMGGMKGMPGGMPGMK
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgttcgataatttaagcgaaaaattagataaagcttttcatatactaaaaggtcacggt
aaaattaccgaagtaaacgttgctgataccttaaaagaagttcgtagagcattattggat
gccgatgtgaattttaaaattgccaaagattttaccgctcgtgtaaaagacaaagcaata
ggtcaggacgtattaacaactttacaaccaggacaattattggtgaagttggttaaagac
gagttgactgaattaatgggaggtgacgttgctggagttaatttgcagggaacaccttca
gtgattttgatgtccggtttacaaggttctggaaagactactttttccggaaaattggct
aattatcttcaaacaaaaaagaataaaaaaccacttttagtagcctgtgatatttaccgt
ccagcggcgattaatcagctgcatgtggtaggagactcgattggtgttgaagtgtattca
gaaccggagaataaaaatcctgttgaaattgctcaaaatgcaatcaaacacgctaaggct
aatggtttcaatgtagttattgtcgatactgccggacgtttggctgtagatcaggaaatg
atggacgaaattgcccgtgttcacgatgctatcaaaccacaggaaactttatttgttgtg
gattcgatgacaggacaagatgcggtaaatacagccaaagctttcaatgatattttaaat
tttgatggtgttatcctgactaaattagatggagatacccgtggtggagctgcattatct
attaaatcagtagtaaacaagccaattaaatttgttggaactggtgagaaaatggaagct
attgatgttttctatccggatcgtatggcggagcgtattcttggaatgggagacgtggtt
tctttggttgaaagagcgcaagagcaattcaatgaggaagaagccagaaaattacaaaag
aaaatcgcgaagaatgaatttggttttgatgatttcctgactcaaattcaacaagtaaag
aaaatgggtaatatgaaggatttggtaggaatgataccaggtgcttcaaaagcgatgaaa
gatgtagaaattgaagacgacgcttttaaacacattgaagctatcatttattcaatgacg
cctttagaaagaaaaaaaccggctttgattgatgtaaaaagaaaagcaagaattgctaaa
ggttccggaacaaaagtggagcagataaatcagttgatgaagcagtttgatcaaatgagc
aaaatgatgaaaatgatgcagggaccaggcggaaaaaatctgatgaaaatgatgggcgga
atgaaaggaatgccaggtggtatgccgggaatgaaataa

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