Flavobacterium commune: BIW12_13375
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Entry
BIW12_13375 CDS
T05006
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
fcm
Flavobacterium commune
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fcm03400
]
BIW12_13375
DNA repair and recombination proteins [BR:
fcm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BIW12_13375
Archaeal homologous recombinant proteins
BIW12_13375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_13
XLF_CC
SSFA2_C
Motif
Other DBs
NCBI-ProteinID:
APA00335
UniProt:
A0A1D9PDE0
LinkDB
All DBs
Position
complement(3224167..3227301)
Genome browser
AA seq
1044 aa
AA seq
DB search
MKIKKVEIQAFRAYDKVENGTFDFELNEKEYADFVSLYAPNGFGKTSFYDAIEYGYTNNI
DRLLKNKNNKDIAKSEKNISNNEKQYILRNRYSNSDLDSFVKLLTNKAEITRSITIPRRG
ASDFKFDEKETENKYFREVILSQDWISGFLKEDKPEDRYKTFIEYFGDKELDKYYNTLIS
LISQNDKEIKKLNDQLKGIQLELKFDGDKDILSKVNEKIELLNEKIKLFNRIDSQTSETA
ILDLTNSITERLNEIEFEVTKHQNLISDLDTLIVGDETLVSFKKFKDNSDELKKLIDKQK
ELALILTRFESLKKEKAELASIQDHNAKLTNEKEQKEKILGLFGKYKETIKLTTDKDEEI
KNLQSSQDTLDKEISNQKVQLSKVEVQISTTQNEINNINLTIGELPEIEKNILNSGDKIK
QLNKDVELKKEELKKNSKNIVSLELFVNELNSALLNIENKIFPSEFDNNFVKYSIQLRKH
DDLKKKIEDENKKLNSLQKEIIENDIFQAELDSFISKGLSIINDKKTDTCPLCTQEYNSY
TDLADKVANNKLLSKTSNALLNRKNEIEKIISGISEDINETIIQLTGLIKKDISESELKI
QELNTQVLNIKQAIIDSETKIDNESKRLSNLRSSISNKPIEEYSKWAKEELDKLSKEIQK
HQLDLASLKDKIKNNEEQSQITIKKIDLFKEDRESLVNDNIVNEIKKFFLENYPNDAIES
ERINKDLVNLSNIQKGYLTKIEKLKIEIEAKENDLASTNEDAVKKELEELNDKIDRLARE
VEIYKTNSKKYIDLDISTVEQEAFNTAINNIKKSNNIKISEYQNEVKELSLLSQLKENVL
PFLKFEEKRKKQSDLKTSKSLKDKINKKLKEEIGKVSLLIEKQIKSFFYEDLINDLYKRI
DPHPDYKKVKFIPDFKDNKPKLNVCVYKEVGDKNFIIPNLYFSQAQLNILSLCIFLAKAL
NAKDDKGNSIDCIFVDDPIQSMDSINILSTIDLLRSIVVNQQKQIILSTHDENFHNLLKK
KIPSNLFKSKFMELETFGKVKANI
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaagaaagtagaaattcaggcttttagagcatacgataaagttgaaaatgga
acatttgacttcgagcttaatgaaaaagaatatgcagattttgtctctctatatgctcct
aatggatttggtaaaacttctttttacgatgctatcgagtatgggtatacaaacaatatt
gatagacttttaaaaaataaaaataacaaggatatcgcaaagtcggaaaagaatattagt
aataatgaaaaacagtatattttaagaaataggtattctaattcagatttggatagtttt
gtaaaattgcttactaacaaggcagagataacaagaagtattactattcccagaagagga
gcttccgattttaaatttgatgaaaaagaaactgagaacaaatatttcagagaagttatt
ttatctcaagattggataagtggatttcttaaagaggataaaccagaagatcgatataaa
acatttattgagtatttcggcgacaaggagcttgataaatattataatacacttatatct
cttatatctcaaaatgataaagagataaaaaagttaaatgatcaacttaaagggattcaa
ttggaactcaaatttgacggagataaagatattctttctaaagtcaacgaaaagatagag
cttctaaatgaaaaaataaaattatttaataggatagattctcagacatcggaaaccgca
atacttgaccttactaattctataaccgaacgtttaaatgagattgagtttgaagttact
aaacatcagaatcttatttcagatttggatacgttaattgttggagatgaaacattagtt
agttttaaaaaatttaaagataactctgatgaactgaagaagttaatagataaacaaaaa
gagttagctttaatcttgactagatttgaaagtttaaaaaaagaaaaagccgagttagcc
tcaattcaagatcataatgcaaagttgacaaatgagaaagaacaaaaggaaaagatatta
ggactgtttggtaaatataaagagactattaaacttacaacagataaagatgaagaaatt
aagaatttgcaatcatcacaagacacattagataaagaaatatcaaatcaaaaagtacaa
ctatcaaaagtagaagttcagatttcaacgacacaaaatgagattaataatattaatcta
actattggcgaattgcctgaaatagaaaaaaacatactgaattcaggagataaaataaaa
caattaaacaaagacgtagaactaaagaaagaggaattaaagaagaactctaaaaacata
gtttctcttgagttatttgttaatgagctaaatagtgctttactaaatattgaaaataaa
atcttcccttcagagttcgacaataactttgttaagtattctatacaattacgaaaacac
gatgatttaaagaaaaaaattgaagatgaaaacaaaaaactaaattcccttcagaaagaa
attattgaaaatgatattttccaagctgaattagatagttttatttcaaagggtctatct
atcattaatgataaaaaaacagatacctgtcctctatgtacccaagaatataattcttat
actgatttagctgataaagtagcaaataataaattgctatctaaaacatcgaatgcatta
ttgaatagaaaaaatgagatagaaaaaattattagtggtatttcagaagatataaatgaa
acgattatacaactgacaggacttattaaaaaggatatctctgaaagtgagttaaaaatc
caggaattaaatacccaagttctcaatattaaacaggcaataatcgattctgaaactaaa
atagataatgaatcaaagagattatcaaacctaaggagttcaatttcaaataaaccaatt
gaagaatatagtaaatgggctaaagaggaattagacaaattgagcaaagaaatacaaaag
catcaattggatttagcttcactaaaagataaaataaaaaataacgaggaacaatctcaa
attacaatcaaaaagatagatttatttaaagaagatcgagagtctcttgttaatgataac
attgttaatgagataaaaaaattctttttggagaattaccccaatgatgctattgaatca
gagcgtattaacaaagacttggtaaaccttagtaatattcagaaaggatatttgaccaag
attgagaagttaaagatagagattgaagctaaggaaaatgatttagccagtaccaatgaa
gatgctgtgaaaaaagaattagaagaactaaatgataaaatagacagattagcacgtgaa
gttgaaatatataaaacaaattcaaaaaaatacattgatttagatatctccacagttgaa
caagaagcctttaatacagccattaacaatataaaaaaatctaataacattaagatttca
gagtatcaaaatgaagtaaaagaattaagtttattatcccaactaaaagaaaatgtatta
ccctttctgaaatttgaagaaaaaaggaaaaaacaaagtgatttaaaaactagcaaatca
ttaaaggataagatcaataaaaagttaaaagaagaaataggaaaagtatcgttacttata
gaaaagcaaataaaatcctttttttacgaagatttaattaatgatttatataaacgaatt
gatcctcaccctgactataagaaagtgaaatttattcctgactttaaggacaacaaacct
aaactaaatgtttgcgtatataaagaggttggggataaaaactttattatacctaatcta
tacttcagtcaagctcaattaaatattttaagtttatgtatttttttagcgaaagctcta
aatgctaaagacgataaagggaattctattgattgtattttcgtcgatgatcctattcag
tcaatggatagtataaacattttatcgactatagatttattaagaagtattgtggtgaat
cagcaaaagcaaataattttatcaacacacgatgaaaatttccataatcttttaaagaaa
aaaattccttcaaatttattcaaatccaagtttatggagctggaaacttttggaaaggtg
aaagcgaatatttaa
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