Flavobacterium commune: BIW12_14975
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Entry
BIW12_14975 CDS
T05006
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fcm
Flavobacterium commune
Pathway
fcm00260
Glycine, serine and threonine metabolism
fcm00460
Cyanoamino acid metabolism
fcm00630
Glyoxylate and dicarboxylate metabolism
fcm00670
One carbon pool by folate
fcm00680
Methane metabolism
fcm01100
Metabolic pathways
fcm01110
Biosynthesis of secondary metabolites
fcm01120
Microbial metabolism in diverse environments
fcm01200
Carbon metabolism
fcm01230
Biosynthesis of amino acids
fcm01240
Biosynthesis of cofactors
fcm04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fcm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
BIW12_14975 (glyA)
09102 Energy metabolism
00680 Methane metabolism
BIW12_14975 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BIW12_14975 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
BIW12_14975 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
BIW12_14975 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
BIW12_14975 (glyA)
Enzymes [BR:
fcm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
BIW12_14975 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
APA00621
UniProt:
A0A1D9PDF3
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Position
complement(3602630..3603904)
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AA seq
424 aa
AA seq
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MQRDKQIFELILEEQDRQIHGLELIASENFVSDEVIEAAGSVLTNKYAEGYPGKRYYGGC
EVVDIVEQIAIDRAKELFGAEYANVQPHSGSQANASVFHACLKPGDKILGFDLSHGGHLT
HGSPVNFSGRVYNPVFYGVDKETGRLDYDKIQEIATKEQPKLIIAGASAYSRDMDFARFR
EIADSVGAILMADISHPAGLIAKGLLNDPIPHCHIVTTTTHKTLRGPRGGLILMGKDFPN
PWGLTTPKGEIRMMSALLDLAVFPGNQGGPLMHIIAAKAVAFGEALQDEFFTYARQLQKN
ANAMADAFVKRGYNIISGGTDNHMMLIDLRNKGISGKDAENALVKAEITVNKNMVPFDDK
SPFVTSGIRVGTAAITTRGLVEEDMETIVAMIDKVLTNHTNEDVIEEVAEEVNEMMSERA
IFVF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgcgacaaacaaatttttgaacttattcttgaagaacaagacagacaaatacac
ggattagaacttattgcttctgagaactttgtaagtgatgaggtgatcgaagctgctggt
tcagttttgacaaataaatatgcagaaggatacccaggtaaaagatattacggaggttgt
gaagtagtagatattgttgagcaaattgcaattgatagagctaaagaattgtttggagcg
gagtatgctaatgttcaacctcactcaggttctcaggctaatgcgtctgtgtttcacgct
tgtttgaaaccaggtgacaaaattttaggttttgatttatctcacggtggtcacttgact
cacggttctcctgtaaacttctcaggacgtgtttacaaccctgttttttacggagttgac
aaagaaacaggtcgtttagactatgataaaattcaggaaattgctactaaagagcagcca
aaattaatcatcgctggagcttcggcttattctcgtgatatggattttgctcgttttaga
gaaatcgctgatagtgttggtgctattttaatggctgatatttcgcatccagccggatta
attgctaaaggattattgaatgacccaattcctcactgtcatattgtaactactacaact
cacaaaactttacgtggacctcgtggtggtttgattttgatggggaaagatttcccaaat
ccatggggattaactactccaaaaggtgaaatcagaatgatgtctgctttattagactta
gctgttttccctgggaatcaaggagggcctttaatgcatattatcgctgctaaagcggtt
gcttttggtgaggctttacaagatgagttctttacttacgctcgtcaattgcaaaagaat
gctaatgcaatggctgatgcttttgtaaaaagaggatacaacatcatctctggaggtact
gataaccacatgatgttaattgacttaagaaacaaagggatttctggaaaagatgctgaa
aatgctttggtaaaagccgaaatcactgtaaataaaaacatggttccttttgatgacaaa
tctccatttgttacttctggtatccgtgtgggaactgctgcaatcacaactcgtggttta
gtagaagaagatatggaaactattgttgctatgattgataaagtattgacaaatcatact
aacgaagatgttattgaagaagtagctgaagaagtaaacgaaatgatgagcgaaagagct
attttcgttttctaa
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