Francisella hispaniensis 3523: FN3523_0250
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Entry
FN3523_0250 CDS
T02078
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fcn
Francisella hispaniensis 3523
Pathway
fcn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fcn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FN3523_0250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fcn03021
]
FN3523_0250
03400 DNA repair and recombination proteins [BR:
fcn03400
]
FN3523_0250
Enzymes [BR:
fcn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FN3523_0250
Transcription machinery [BR:
fcn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FN3523_0250
DNA repair and recombination proteins [BR:
fcn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FN3523_0250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
POLH-Rev1_HhH
RAD51D_N
DUF4094
Motif
Other DBs
NCBI-ProteinID:
AEB28107
UniProt:
F4BIW3
LinkDB
All DBs
Position
243587..244558
Genome browser
AA seq
323 aa
AA seq
DB search
MSNNNSKQEFVPNIQLKEDLGAFSYKVELSPVEKGMAHILGNSIRRVLLSSLSGASIIKV
NIANVLHEYSTLEDVKEDVVEIVSNLKKVAIKLDKGIDRLDLELSVNKSGVVSAGDFKTT
QGVEIINKDQPIATLTNQRAFNLTATVSIGRNVGILSAIPTELERVGDIAVDADFNPIKR
VAFEVFDNGDSETLEVFVKTNGTIEPLAAVTKALEYFCEQISVFVSLRVPSNGKTGDVLI
DSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYSESQLMKIPNLGKKSLNEIKQ
ILIDNNLSLGVQIDNFRELVEGK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaataataattcaaagcaggaatttgtacctaatatacagcttaaagaagactta
ggagcttttagttataaagttgaactttctcctgtagaaaaaggtatggctcatatcctt
ggtaactctattagaagggttttattatcttcactatcaggtgcatctataattaaagta
aacatcgctaatgtattacatgaatactctactttagaagatgtcaaagaagatgttgtt
gaaattgtttctaatttgaaaaaggttgcgataaagcttgataaaggtatagatagacta
gatttagaactatctgtaaataagtcaggtgtagttagcgctggagactttaaaacaact
cagggtgtagaaataataaataaagatcagccaatagctactttgacaaatcaaagagca
tttaacttgactgctactgtgagcataggtagaaatgttggtatactttctgcgatacca
acggaacttgagagagttggtgatatagctgtagatgctgattttaaccctattaagaga
gttgcttttgaggtttttgataatggtgatagtgagactttggaagtatttgtaaagaca
aatggtactatagaaccactagcggctgttacaaaagctttagagtatttctgtgagcaa
atatcagtgtttgtatctttaagagtacctagtaatggtaaaacaggtgatgtattaata
gattctaatattgatcctattcttcttaaaccaattgatgatttagaactaactgtgaga
tcatccaattgtctgcgtgctgagaatatcaagtatcttggagatttagtgcagtattct
gaatcacagctaatgaagatacctaatctaggtaagaaatctcttaatgagatcaagcaa
attttaatagataataacttatctctaggtgttcaaattgacaattttagagaactagtt
gaaggaaaataa
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