Francisella hispaniensis 3523: FN3523_0954
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Entry
FN3523_0954 CDS
T02078
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fcn
Francisella hispaniensis 3523
Pathway
fcn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fcn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FN3523_0954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcn03019
]
FN3523_0954
Enzymes [BR:
fcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FN3523_0954
Messenger RNA biogenesis [BR:
fcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FN3523_0954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_30
HI1480
MerR-DNA-bind
AAA_22
Flavi_DEAD
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AEE26257
UniProt:
F4BFL3
LinkDB
All DBs
Position
complement(978905..980242)
Genome browser
AA seq
445 aa
AA seq
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MQFSDLGLNPLICSALEKKGYTKPTPIQAKAIPLVLKGSDVMASAQTGTGKTAGFTLPII
QRLLDQPKAQANRIKTLILTPTRELAAQIQEQIQIYAANTHIRSAVVFGGVSINPQMMKL
RKGVEILIATPGRLLDLYSQNALKFDSLNTFVLDEADRMLDMGFINDLKKIHKLLPKKLQ
TLMFSATFSPEIKNLANDFLNNPQSVSADVVNTTVKKITQKIYTLDKSTKINALISLIKD
QDLHQVLVFSRTKHGANKISEKLNNAGITSSAIHGNKSQTARTKALADFKSKEINVLVAT
DIAARGIDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQDGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPITSMSRKTKAKKIDEVKIIAAKRANKNNKSTNQKKSSNH
NSDFAKKIRQKIHQNKSVRKPKAQD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctcagatttaggtttaaatcccttaatatgtagcgctttagaaaaaaaaggc
tatacaaaaccaactccaattcaagcaaaagcaataccattagttctaaaaggtagtgat
gtcatggcatcagctcaaacaggtacaggcaagacagcgggctttacattaccaattatc
caaagacttcttgatcaaccaaaagctcaagcaaatcgaatcaaaactttgattttaact
cccacaagagagttagcagcacaaatacaagaacaaattcaaatatatgccgcaaataca
catatccgttcagcagtagtttttggtggagtgagtattaatcctcaaatgatgaaatta
cgtaaaggtgttgagattctgatagctactcctgggagattactagacttatatagtcaa
aatgctcttaaattcgatagtttaaatacctttgttttagatgaagcagacagaatgtta
gatatgggtttcattaatgatttaaaaaaaattcataagcttttaccgaaaaagttacaa
acactaatgttctcagcaacattttcaccagagataaaaaatcttgctaatgattttctt
aacaatcctcagtcagtatcagcagatgttgtaaatacaacagtcaaaaaaattactcag
aaaatttatacactagataaatcaactaagattaatgctttgatttcactaataaaagat
caagatctacatcaagttttggttttttcacgtacaaagcatggtgctaataagatatca
gagaaactaaataatgctggtattacaagtagcgcaattcatgggaataaaagtcaaaca
gctagaacaaaagcattagcagattttaaatccaaggaaataaatgttttagttgctaca
gatatagcagctcgtggaattgatattgcccaattgccatgtgtgataaatcttgatcta
ccaaatgttgctgaagattatgtccatagaatagggagaactggcagagcagggcaggat
ggtctagctatttctttagtaagtgcagatgaagttgaatcgctatcaaatatagaacat
ttaattgggcatcttttaccaagagaagagttagaaggttttgaagcgactcataatgtt
cctattacaagtatgtcacgcaaaactaaggctaaaaaaattgatgaagttaaaataata
gctgcaaagagagcaaataaaaataataaaagcactaatcaaaagaaaagctcaaatcat
aattcagattttgctaaaaaaatcagacaaaaaattcatcagaataaaagtgttagaaag
ccaaaggctcaagattaa
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