Francisella hispaniensis 3523: FN3523_1498
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Entry
FN3523_1498 CDS
T02078
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
fcn
Francisella hispaniensis 3523
Brite
KEGG Orthology (KO) [BR:
fcn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fcn03019
]
FN3523_1498
Enzymes [BR:
fcn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FN3523_1498
Messenger RNA biogenesis [BR:
fcn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FN3523_1498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_19
NTPase_1
AAA_23
T2SSE
RsgA_GTPase
nSTAND3
ResIII
HA2_N
ABC_tran
NACHT
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AEE26801
UniProt:
F4BH57
LinkDB
All DBs
Position
complement(1543839..1547762)
Genome browser
AA seq
1307 aa
AA seq
DB search
MSHNDFYNLLDKIPTKLRGKYISLIRNKKKSEKVLVYELEKIIKESNRRILPKINYPDLP
VAERVDDIKKLIQDNQVIVVAGETGSGKSTQLPKICLDLGLGKRGLIGHTQPRRLAARSI
ATRVATEIGDQSKVSFKIRFSDQTSENTLIKVMTDGVLLSEIKNDRFLSQYEVIIIDEAH
ERSLNIDFLLGCIKKILPYRPDLKVIITSATIDHQKFINYFQNAKDITISGRTYPVEIRY
QNDKDFEELSLQERILYALDELGRGDVLVFLPTERDIHETLAYLNKQNLRFTEVLPLFSR
LSNKDQNKIFNPEGSVRRVILATNVAETSLTVPRIKYVIDSGLARISRYSYRTKVQRLPI
EKISQASANQRAGRCGRLSAGICIRLYSEEDFNNRKEYTEPEILRTNLASVILQMLFLKL
GSIQDFPFIDAPDARFVKDGFKLLFELRAISELNYSKPKITADGIKMATMPLDPKLAKIV
IEGHRQNTLREIVSIVSFLSVQDPRERPLNFQQKADEKHSIDKDKSSDFIAILNLANRLN
SDLKSLSNREKKEYFKKNFISPIRFNEWNDIYRQIVEVVHGFGWRLNNVIKSGLIAESPV
RRKTGHSHASGNLMIDDQGLKDTHLHGYDNVGDNINYENLHKAIASGFLSNIGFNYENAE
YLGARGLKFFIFPGSSQFKSKPKWILASEIVETTKTYARNVAKIEPEWLESLAEHLVKKH
YDEPIWSKKRRAVIVNERVILYGLEIVSKRVVQYSKINPQEAREIFIREALVNGDFDSKA
YFYQQNLELINQVEDLENKSRRKDILVDEQTMFEHYDAFIPDGVCDGATFDKWLKTVRKE
QQKSFIFNLESLMQHDAKEITQQKFPDVLTIADMHLPLEYHFDPLDERDGATVTVPIVFI
NDINPAVLEWGVYGFLYDKIVALLRALPKNIRKSCVPVPTYAQAIFESIDFDKDRYSPLK
SMIAKHITRIVGFVVDETVWQNEELEKYLILNIKVVDEQGKTLVVGKDINALKQKLKNLV
NKPKQAVDEKIYYDWDFADIVLTSEIKEYGIIVKVYNCLEEYKDGVKLSYKATLAEAESC
MKRALKRLIKIRLQNQLSQKIKNNDLTSLSMSLKLSDSKDSVVDKAIDLSFFDNIELPYA
KEDFERFYALGMQKFVSNKAKVEALFLEITKFKSQLEKKLNVKKIPLNFIELFTATRNEL
NELFTDNYLSQPMIYLQRYKYYIQALETRLDKAKLNLQRDRTYQLEVDDLKAKLAKKLVT
KHLSVSGEEVTKIGFLIKELWISWYLQNVKTIESVSFKKALVYINEI
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcataatgacttttacaatctcttagataaaattcctactaaattgcgtggtaaa
tatatttcactcattagaaataaaaagaagtccgaaaaagttttagtttatgagcttgag
aaaataattaaagaatcgaatcgaagaatactgcctaaaataaattatccggatcttcct
gttgctgaaagagttgatgatataaaaaagcttatacaagataatcaagttattgttgtg
gcaggagaaacaggctctggtaagtcaacacaattgcctaaaatatgtcttgatttagga
ctgggtaaacgtggattaattggacatactcaaccgagaagactcgcagctagatcgatt
gctactagagtagctactgagattggtgatcaatcaaaagtatcttttaaaatacgcttt
tctgatcaaacttctgaaaatactttaatcaaagtgatgacagatggtgtgctactatct
gaaatcaagaatgataggtttttatcacaatatgaggttatcattattgatgaggctcat
gaaagaagtttaaatattgactttctgcttggttgtataaaaaagatattaccatataga
cccgatttaaaagtaatcattacctcagcaactatcgatcatcaaaagtttataaattat
tttcaaaatgctaaagatatcacaattagtggtagaacatatcctgttgaaattcgttat
caaaatgataaggattttgaagagctctcattacaagaaagaatattgtatgctcttgat
gaacttggcaggggagacgttttagtttttttgcctacagaaagagacattcatgaaaca
ttagcatatttgaataaacaaaatcttagatttacagaagttttacctttgttttcgagg
ttgtcaaataaagatcaaaataaaatatttaatcctgagggttctgtgcgtagggttatt
ttagcaacaaacgttgctgagacatctctgacagtacctcgtattaagtatgttatagat
tcaggtttagcgcgaataagtagatatagttatcgcactaaggtacaacgtctaccgata
gagaaaatttctcaagcaagtgctaatcaaagagcaggtcgctgtggtagactatctgct
ggtatatgtatacgcctttatagtgaagaagactttaataatcgcaaagagtacacagag
cctgaaatcttacgtactaatttggcatcggttattttacagatgttatttctaaaatta
ggaagcatacaagattttccatttattgatgctcctgatgcaaggtttgtaaaagatggt
ttcaaactcttgtttgaattacgagctatctcagagcttaactatagcaaaccaaagatt
actgcagatggtatcaaaatggcgactatgcctttagatccaaaacttgcaaaaatagtc
atagaaggccataggcaaaatacgcttagagagattgtctcgattgttagctttttgagt
gtacaggacccgcgtgagagacctctgaactttcagcaaaaagctgatgaaaaacattca
atagataaagataaatcttctgattttatcgcaattttaaatttagcaaatagactaaat
tctgatttaaaaagcttatctaatagagagaaaaaagagtattttaaaaagaactttatt
tctccaattagatttaatgaatggaatgatatttatcgacaaattgttgaagttgttcat
ggatttggttggagactaaataatgtcattaagtcgggcttgatcgcggagtctccagta
cgaagaaagactggtcattcccacgcaagtgggaatcttatgattgatgatcaaggtttg
aaagatacccatctgcacgggtatgacaatgttggtgataatataaactatgaaaactta
cacaaagccatagccagcggttttttaagtaatattggctttaattatgaaaatgctgag
tatttaggagctagagggcttaagttttttatatttccaggatcttcacaatttaagtct
aagccgaaatggatcttagcatcagaaatagtcgaaaccactaaaacatacgctcgtaat
gttgcaaaaatagagccagaatggttagagagcttagcggagcatcttgtcaaaaagcat
tatgatgagcctatttggagtaagaagcgtagagctgtaatagtaaatgaaagggtaata
ttgtacggcttagagatagtttcaaaaagagtagtgcaatactcaaagataaatcctcaa
gaggctcgcgaaatttttattagagaagctttagtaaatggtgattttgactctaaagca
tatttttatcaacaaaatctcgagcttataaatcaagttgaagatcttgaaaataaatca
cgccgaaaagatattttggtggatgagcagacgatgtttgagcattatgatgcttttatt
ccggatggggtttgtgatggcgcaacatttgataaatggctaaaaacagttagaaaagag
cagcagaaaagtttcatttttaatctagaaagtctgatgcaacatgatgctaaagaaatt
acgcagcagaagtttcctgatgtcttgactattgcagatatgcacttgccattagaatac
cattttgatcctttagatgaacgagatggcgcaactgttacagtaccgatagtttttatt
aatgacataaatcctgcagtgttagagtggggggtgtatggtttcttgtatgacaagatt
gtcgctttgttacgcgctttaccgaaaaatatccgtaaaagctgtgtgccagtgccaact
tatgctcaagctatatttgaatcaatagattttgataaggatagatactctcctttgaag
tctatgattgctaaacatattacgcgaatagttggttttgtagttgatgagacggtatgg
cagaatgaggaactagagaagtatctaatactaaatataaaagttgttgatgagcaaggt
aaaacactggtagttggcaaagatatcaatgctttaaaacaaaagctcaaaaatctagtt
aataaacctaagcaagcagtcgatgagaaaatttattatgattgggattttgctgatatt
gttttgactagcgaaattaaagagtacggcataatagtcaaagtctataattgtcttgag
gaatataaggacggtgtgaaattgtcttataaagcaactttagcagaagcagaatcctgt
atgaaaagggcgttgaagagacttattaagatacgtctacaaaatcaattatcacaaaaa
atcaaaaacaatgatttaacaagtttatcaatgtcattgaaactaagtgactcaaaagat
agtgtggttgataaggctatagatttgagtttttttgataatattgagctaccatatgct
aaagaagattttgaaagattctatgctttagggatgcaaaagtttgtttcaaataaggct
aaagtcgaagcattgtttttagaaataactaagtttaaatcacagcttgaaaaaaaacta
aatgttaaaaaaataccgcttaattttattgaactttttacagctactagaaatgagctt
aatgagctttttactgacaattacctatcgcaacctatgatttacttgcagcgatataag
tattatattcaagctttagaaactcgattagataaggctaaactaaatctgcaaagagat
aggacctatcaattggaggttgacgatctaaaagctaagctagctaaaaagcttgttact
aaacatcttagtgttagtggcgaggaggtaaccaaaattggttttctgataaaagagtta
tggatttcttggtatttacaaaatgtaaaaactattgaatcagtttcatttaagaaagct
ctagtttatattaacgaaatatag
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