Flavobacterium columnare: FCOL_00060
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Entry
FCOL_00060 CDS
T01653
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
fco
Flavobacterium columnare
Pathway
fco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCOL_00060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_00060
Enzymes [BR:
fco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
FCOL_00060
DNA repair and recombination proteins [BR:
fco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FCOL_00060
Prokaryotic type
FCOL_00060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
HHH_2
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AEW84869
UniProt:
G8X6H7
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All DBs
Position
complement(9106..10137)
Genome browser
AA seq
343 aa
AA seq
DB search
MNFSNIIIAWYQHNKRDLPWRRTTDPYLIWLSEIILQQTRVVQGLPYYLAFTKQFPKIQD
LAKADEEEVLKLWQGLGYYSRARNLHTTAKYLTEQNNGLFPNNYQDLQKLKGIGEYTAAA
IASFSYNECVPVIDGNVYRVIARYFGLDLDISLSKTKKSFFEMASEVICPNQPAQFNQAI
MEFGALQCIPQNPNCAICPLQNSCYALSTNNIANLPVKTKKTKKTNRYFHYLLIIDQNQK
VLYQQRTKKDIWQNLYELPLIETSKKEEANEIKNYISKQYSNIKRITLLEHEQIIHKLSH
QNLDINFWKIEINVQHKVGLSYHELKKLPTPIVIYNFLERTPY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaattttagcaatataattatagcttggtaccagcataacaaaagagatcttccttgg
cgcagaacaacagatccttacttgatctggctatccgagataattttacaacaaacccgt
gtggttcaaggtcttccttactacttagcctttacaaaacagttccctaaaatacaagat
ttagcaaaagctgatgaagaagaagttcttaaattatggcagggtttgggctattattcc
agagcgagaaaccttcatactacagctaaatacttaacagaacaaaacaatggtttattc
cctaacaactaccaagatcttcaaaaactaaaaggaattggtgaatatacagctgctgct
attgcctctttttcatacaatgaatgcgtccctgtaatagatggcaacgtatatcgagta
attgctcgttattttggcttggatctagacattagtttatctaaaacgaaaaaatctttt
tttgagatggcttctgaggttatttgccctaatcaaccggctcaatttaatcaagccatt
atggaatttggagctctacaatgtattcctcaaaatccaaattgtgctatttgccctcta
caaaatagctgttatgcattaagcacaaataacatagccaatctacctgttaaaacaaaa
aaaacaaaaaaaaccaatcggtattttcactatttgcttattattgatcaaaatcaaaaa
gtactataccaacaaagaacaaagaaagacatttggcaaaatttgtatgaattacctctt
attgaaacgtctaaaaaagaagaagcaaatgagataaaaaattatatctcgaaacaatat
tccaatattaaaagaataactcttttagaacatgaacaaataattcacaaactctctcac
caaaatttagatattaatttttggaaaatagaaattaatgtacagcataaagtaggtctg
tcttaccatgaattgaaaaagctcccaacccctattgtcatttataatttcttagaaagg
actccatattaa
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