Flavobacterium columnare: FCOL_00065
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Entry
FCOL_00065 CDS
T01653
Name
(GenBank) histone-like DNA-binding protein HU-alpha
KO
K03530
DNA-binding protein HU-beta
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fco03032
]
FCOL_00065
03036 Chromosome and associated proteins [BR:
fco03036
]
FCOL_00065
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_00065
DNA replication proteins [BR:
fco03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FCOL_00065
Chromosome and associated proteins [BR:
fco03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FCOL_00065
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FCOL_00065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AEW84870
UniProt:
G8X6H8
LinkDB
All DBs
Position
10269..10577
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AA seq
102 aa
AA seq
DB search
MTKADIVAKIADKLGLEKGDVQATVESFMDEVKNSLETGDNVYLRGFGSFIIKTRAEKTG
RNISKNTTIKIPAHNIPAFKPAKVFVEGVKEKVNVEVLEESK
NT seq
309 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagcagatatcgtagctaaaattgctgataaattaggcttagaaaaaggagat
gttcaggctacagtagagtcttttatggacgaagttaaaaattcgttagaaacaggtgat
aatgtttatttgagaggatttggaagttttattatcaaaacaagagctgaaaaaacaggt
agaaatatttcaaaaaatacaactatcaaaattccagctcataacatcccagcttttaaa
cctgcaaaagtatttgttgaaggtgtaaaagaaaaagttaacgtagaagtattagaagaa
tcgaaataa
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