Flavobacterium columnare: FCOL_00285
Help
Entry
FCOL_00285 CDS
T01653
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fco
Flavobacterium columnare
Pathway
fco00061
Fatty acid biosynthesis
fco00071
Fatty acid degradation
fco01100
Metabolic pathways
fco01212
Fatty acid metabolism
fco02024
Quorum sensing
fco04146
Peroxisome
Module
fco_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FCOL_00285
00071 Fatty acid degradation
FCOL_00285
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FCOL_00285
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCOL_00285
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fco01004
]
FCOL_00285
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fco04147
]
FCOL_00285
Enzymes [BR:
fco01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FCOL_00285
Lipid biosynthesis proteins [BR:
fco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FCOL_00285
Exosome [BR:
fco04147
]
Exosomal proteins
Exosomal proteins of breast milk
FCOL_00285
Exosomal proteins of breast cancer cells
FCOL_00285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
AEW84912
UniProt:
G8X6M0
LinkDB
All DBs
Position
62245..64017
Genome browser
AA seq
590 aa
AA seq
DB search
MTNITRLFDFPYYQLEQNNLPDALVTKYNGKWVKTSTQEYLDRANAVSRALIAMGVQKDD
KIAIISSNNRTEWNIMDIGVLQIGAQTVPIYPTISEQDYEYILNHSESKYCFVSDKEVLR
KLNSIKANLSNLVAVFTFDEISGEKNWADLLTIGKDTRTQNFVEERKNNVKPSDLATIIY
TSGTTGKPKGVMLSHNNIVSNVLNSSDRIPLVAGQAKAMSFLPICHIFERVILYIYQYYS
ISIYFAESIDKISDNFKEVQPDVFTVVPRLLEKVYDKIYAKGTELTGIKKKIFFWAVELG
LKYEPYGKNGWWYEFQLKIARKLIFSKWQEGLGGNVKLMVSGSAALQTRLTRVFSAAGMP
VMEGYGLTETSPVISVNDMRNGLFRIGTVGKPIKNVEVKIGEDGEILFKGPNLMMGYYKD
QAQTDEVIKGGYFHTGDIGEFDKDGFLRITDRKKEMFKTSGGKYVAPQILENTFKQSRFI
EQIMVIGEGQKMPGAIIQPAFEFIREWAHIHHINIGSTNEELIQNTEVIKRIYQEINHFN
AKFGNWEQVKKFELTPDVWSIDGGQLTPTLKLKRKVVLEKYKELYAKIYQ
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacattacaagattatttgattttccttattatcaactagaacagaacaattta
ccagatgcgttggttacaaaatataacggaaaatgggttaaaacgtctacccaagagtat
ttagatagagcaaatgccgtttcaagagcacttattgccatgggggtgcaaaaagatgat
aaaatagctattatttcatctaataacaggacagaatggaatattatggacataggtgta
ttacaaattggagctcaaacagttcccatttatcctaccatttctgaacaagattatgaa
tatattctaaatcattctgaatctaaatattgcttcgtatctgataaagaagttttaaga
aaattaaattcaattaaagctaatctatctaacttggttgccgtttttacatttgatgaa
atttcaggcgaaaaaaactgggctgatttgttaactatcggaaaagatacccgtactcaa
aattttgttgaagaacgtaaaaataatgtaaaaccaagtgacttagcaaccattatttat
acttctgggactacgggtaaacctaaaggtgtgatgttatcccataataacattgtatct
aatgttttgaatagttctgatagaattccattagtagcaggtcaagcaaaagctatgagc
tttcttcctatctgtcatatttttgaaagagttatcttgtacatttatcaatattattct
atttcaatttattttgccgaatctattgataaaatttcagataatttcaaagaagttcag
cccgatgtttttactgttgtgcctcgactattagaaaaagtgtacgataagatttatgca
aaaggaactgaattaacgggtattaaaaagaaaattttcttttgggcagtagaattaggt
ttaaaatatgaaccatacggtaaaaacggctggtggtatgaatttcaattaaaaattgct
cgtaaattgatattcagtaaatggcaagaaggcttaggaggaaatgtaaaattaatggtt
tctggaagtgcggcactacaaactcgattaactcgcgtattttcagctgcaggaatgcca
gtaatggaaggttacggtcttaccgaaacatcgcctgttataagtgtaaatgatatgcgt
aatggattatttcgaattgggactgtaggaaaacctataaaaaatgtagaagtaaaaata
ggagaagatggtgaaatccttttcaaagggcctaacttaatgatgggatattacaaagat
caagcacaaacggatgaagtaataaaaggaggatatttccatacaggagatattggagaa
tttgataaagatggttttttacgtataacagatcgtaaaaaagaaatgtttaaaacttca
ggaggaaagtacgtagctcctcaaattttagaaaacacattcaaacaatctcgattcata
gaacaaataatggttataggagaagggcaaaaaatgccaggagctattatccagccagct
tttgagtttataagagaatgggctcatattcatcacataaacattggatctacaaacgaa
gaacttattcaaaatacagaagtaattaaacgtatttatcaagaaataaatcattttaat
gctaaattcggaaactgggaacaagttaaaaaattcgaacttacaccagatgtatggtca
atagatggaggacaactcacacccactttaaaactaaaacgtaaggttgttttggaaaaa
tataaggaactttatgcaaaaatttatcaatag
DBGET
integrated database retrieval system
