Flavobacterium columnare: FCOL_00520
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Entry
FCOL_00520 CDS
T01653
Name
(GenBank) ribosomal protein S6 modification protein RimK
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fco03009
]
FCOL_00520
Ribosome biogenesis [BR:
fco03009
]
Prokaryotic type
ribosomal protein modification factors
FCOL_00520
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RimK
Rimk_N
RimB-like
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
R2K_3
Dala_Dala_lig_C
GARS_A
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AEW84959
UniProt:
G8X7E5
LinkDB
All DBs
Position
complement(118592..119962)
Genome browser
AA seq
456 aa
AA seq
DB search
MSSKKEIIGSEEWCSFPELEIPYIKARVDSGAKTSAMHATNITPFSKNGENWVKFDVNPL
QSNVKITRHCEAKLIDKRIVKSSSGYREQRYVIKTNLSIGNETFPIEVTLANRDSMGFRM
LLGREAMVGKMMVDPEEKYLLGQPSFDEIKSHYHVNKESSAKLRIAVLASNPSLYSNRRI
MEAGEMRGHEMEFLNIKECYIKLDATTPEIHYRGGRVLDNFDAVIPRIRPSITYYGCTLI
RQFEAMRVFTLNSAAAITQSRDKLFSLQLLLQSGIDIPTTGFANSPLDTNDLIKMVGGSP
LIIKLLEGTQGKGVVLAETKKAAESVINAFKSLNANILVQEFIKEANGKDLRLFVVDGKV
VAAMQREAAPGEFRANIHMGGSASVIKVTAAEKKIAIKAAKAMDLKVAGVDIIRSSKGPL
LLEVNSSPGLEGIEGATHKDIAGEMIKAIEKSFKIK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctaaaaaagagattatagggagcgaagaatggtgttcctttcctgaattagaa
atcccttatattaaggctagagtggattctggagctaagacatccgctatgcacgccaca
aatattactcctttttctaaaaacggagaaaattgggtcaaatttgatgtaaaccctctt
caaagcaatgttaaaataaccagacattgtgaagctaaattaattgataaaagaattgta
aaaagttctagtggctatagggaacaacgctatgtcattaaaaccaatttaagtattggt
aatgaaacgtttcctattgaagtaaccttagccaatagagattccatggggtttcgtatg
cttttaggacgcgaagccatggtgggaaaaatgatggtcgatcctgaagaaaaatacctc
ttaggtcaaccttcctttgatgaaattaaatcccattaccatgttaataaagaatcaagt
gctaaactacgaattgcagtactagccagcaatcctagtttatacagtaaccgccgaata
atggaagctggtgaaatgcgaggtcatgaaatggagtttcttaatatcaaagaatgttat
attaagctagatgctacaactcctgaaattcattatcggggcggacgcgtcttagataat
tttgatgctgttatccctcgtattcgaccaagtattacttattatggatgcaccttgatc
cgccaatttgaagctatgagagtttttactcttaactccgcagcggccattacccaatct
agagacaaattgttttctcttcaattattattacaaagtggtattgacattcctactacg
ggatttgctaattctcccttggatacaaatgatttgattaaaatggttggaggatcacca
ctaataatcaaattattagaaggaactcaaggaaaaggagttgtattagcagaaacaaaa
aaagcagctgaatccgtaatcaatgcttttaaaagtcttaatgcaaatattttagtacaa
gaattcatcaaagaagctaatggtaaagatttacgcctttttgttgtagatggcaaagtg
gtagccgctatgcaaagagaagctgctcccggtgagttcagagcaaatatacacatggga
ggaagtgcatctgttataaaagtaactgctgctgaaaaaaaaatagccatcaaagcagcc
aaagcaatggatttaaaagtagctggagtagacatcattcgctctagtaaaggacctctt
ctattagaagtaaattcttctcctggactagaaggtatagaaggagctacacataaagat
attgctggcgaaatgataaaagctattgaaaaaagttttaaaataaaataa
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