Flavobacterium columnare: FCOL_00530
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Entry
FCOL_00530 CDS
T01653
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fco03032
]
FCOL_00530
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_00530
Enzymes [BR:
fco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FCOL_00530
DNA replication proteins [BR:
fco03032
]
Prokaryotic type
DNA Topoisomerases
FCOL_00530
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FCOL_00530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AEW84961
UniProt:
G8X7E7
LinkDB
All DBs
Position
122826..125384
Genome browser
AA seq
852 aa
AA seq
DB search
MSEGEKLIPINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLFGMHELGVFSNR
PHKKSARIVGEVLGKYHPHGDSSVYDAMVRMAQDWSLRYLMVDGQGNFGSIDGDSPAAMR
YTEARMKKFSEEMLADIDKETVDFQLNFDDTLEEPKVMPTKVPNLLVNGASGIAVGMATN
MAPHNLSEVIDGTLAYINNNDIEVDELATYIKAPDFPTGGVIYGMDGVREAFKTGRGRVV
IRAKVGFEEVEGREAIIVTEIPYQVNKAEMIKKTADLVNDKKIEGISTIRDESDRNGMRI
VYILKRDAVPNVVLNTLYKYTQLQSSFSVNNIALVNGRPQMLNLRDLIHYFVEHRHDVVT
RRAQFDLRKAEERAHILEGLIIASDNIDEVIALIRSSKDGEEARGKLIERFNLSEIQARA
IVEMRLRQLTGLEQDKLRAEYEEIMKLIAELKALLASKELRMNLIKEELLEVKEKYGDER
RSTIEYSGGDMSIEDLIADEQVVITISHAGYIKRTPLSEYKTQNRGGVGQKSAGTRDQDF
LEHMYVATNHQYMLFFTQKGKCFWMRVYEIPEGSKVAKGRAIQNLINIEQDDKVKAFICT
KDLKDQEYINSHYVIMVTKEGQVKKTSLEQYSRPRTNGVAAITIKEGDELLEAKLTTGNS
QVLIAGKSGKLVRFEEEKTRPMGRTASGVRGVTLADEKDEVIGMVSIDRDHVNDSQILVV
TENGYGKRTKLVDDDGEDVYRITNRGGKGVKTLNITEKTGSLIAINNVTDDDDLMIINKS
GLTIRMRVSDLRVMGRATQGVRLINIKGKDSIAAVCKVMREEDEEETNLEENELNDHLIT
DSETETELENQE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggagaaaagttaattccaattaacattgaagacgaaatgaaatcagcttac
atcgattattcgatgtcagttattgtatcaagagcgttaccagatgttagagatggttta
aagcctgtgcaccgtcgcgtgttatttggaatgcatgaattaggagttttttctaataga
ccacacaaaaagtcagcgagaattgtaggggaagtgttaggtaagtatcacccacatgga
gactcttctgtatatgatgccatggttcgtatggcacaagattggagcttacgctattta
atggttgacggtcaaggtaactttggatcaatagatggggatagtcctgccgctatgcgt
tatacagaagctagaatgaaaaagttctctgaagaaatgttagcggatattgataaagaa
actgttgattttcaattaaactttgacgataccttagaagaacctaaagtaatgccgacc
aaagtacccaacttgcttgtaaatggagcatctggtattgccgttggtatggccactaac
atggcacctcataatttatcagaagttatagatgggactttagcttatataaataataat
gatattgaagtagacgaattagcgacttacattaaagctcctgattttccaacgggaggg
gttatttatggaatggatggcgtccgtgaagcatttaaaacgggacgtggtcgtgtagta
atccgtgctaaagtaggttttgaagaagtagaaggacgtgaagctattattgtaaccgaa
ataccttatcaagtaaataaagcagaaatgattaaaaaaactgctgacttggtaaacgat
aaaaaaattgaagggatatcaaccatacgagatgagtcggatagaaatggtatgcgtatc
gtttatatcttaaaaagagatgctgtacccaatgtagtattaaatacactctataaatat
acgcaattacaatcgtcatttagtgttaataacattgcgttagtaaacggaagacctcaa
atgttaaatctgagagatttaatacattattttgtcgaacatcgccatgatgtggttacc
cgtcgagcgcagtttgatttgcgaaaagcagaagaaagggctcatattttagaagggtta
attatagcatcggataatattgatgaggttattgcgctgattcgttcttctaaagatgga
gaggaagcacgtggaaaattaatcgaacgatttaatctctctgaaattcaagctcgtgct
attgtagaaatgcgtttaagacaattaacaggtcttgaacaagataaactacgtgccgaa
tatgaggaaattatgaagttgatagcggagttaaaagcattattagctagtaaagaactt
cgtatgaatttaattaaagaagaattactagaagttaaagaaaaatacggtgacgaacgt
cgttccacaattgagtattcaggaggagatatgagtattgaagacttaattgctgatgaa
caagttgtcattactatatcgcatgcgggttatataaaacgtactccgttgtcagaatac
aaaactcaaaatagaggaggagttggacaaaaatcagcaggcacccgtgatcaggatttc
ttagaacacatgtatgtagcaaccaatcatcaatatatgttattctttactcaaaaaggg
aaatgtttttggatgagagtttatgaaatcccagaaggaagtaaagtagctaaaggacgt
gctattcaaaacttgataaacattgagcaagatgataaggtaaaagcctttatttgtaca
aaagatctaaaagatcaagaatacatcaatagtcactatgtaatcatggtaacgaaagaa
ggacaggttaaaaaaacgtctttagagcaatattcgcgtccacgtactaatggagtagca
gctattactataaaagaaggcgatgagttgttagaagcaaaattaacaacaggaaatagt
caagttttaattgctggtaagtctggtaaactagttcgttttgaagaagaaaaaaccaga
ccaatgggaagaaccgcttctggagtaagaggtgtaactcttgccgacgaaaaagacgaa
gtaataggaatggtatctattgatcgagatcatgtaaatgattctcaaatattggtagtt
acagaaaatggttatggaaaacgaactaaattagtagacgatgatggagaagatgtgtac
agaattacaaaccgtggaggaaaaggagttaaaaccttaaatattacagaaaaaacaggc
tcacttattgctattaataatgttacggatgatgatgatttgatgattatcaacaaatca
gggttaaccattcgaatgagagtttcagacttacgtgttatgggacgagcaacgcaagga
gtccgtttgattaatatcaaaggaaaagattctattgcagcagtatgtaaagtaatgaga
gaagaggatgaagaggaaactaatttagaagaaaacgagttaaacgatcatttaataaca
gattctgaaacagaaacagaattagaaaatcaagaataa
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