Flavobacterium columnare: FCOL_00730
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Entry
FCOL_00730 CDS
T01653
Name
(GenBank) LysR family transcriptional regulator
KO
K04761
LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fco03000
]
FCOL_00730
Transcription factors [BR:
fco03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FCOL_00730
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
SBP_bac_3
HTH_30
CAP18_C
Motif
Other DBs
NCBI-ProteinID:
AEW84997
UniProt:
G8X860
LinkDB
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Position
complement(180853..181794)
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AA seq
313 aa
AA seq
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MTITQLQYVLAVAEHKNFTQAAEKCFVTQPTLSMQIQKIEEELDIIIFDRTKKPIQLTEV
GKKIVEQAKNIVNEADRIQDIVDQEKGFVGGEFRIGIIPTVMPTLLPMFLNNFIKKYPKV
KLIIEELNTNEIITKLKNGHLDAAIAATPLEEEKIKEVVLYYEPFMVYVPESHSKFNKAE
LEIGDLNVDEILLLQDGHCFRDGILNLCKNKNTSKENKFQLESGSFETLIRLANEGLGVT
LLPYLHTLELSDKEKLKLRHFKDPKPSREVSLLIPKNELKIHIIDALRNVISGVLRGAIA
FQNVEIISPLSKK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgactattacacaattacaatatgtattagctgttgcagaacacaaaaatttcactcaa
gcagctgaaaaatgttttgtaacacagcctacactaagtatgcaaattcaaaaaatcgag
gaagaattggatattattatttttgatagaacaaaaaaaccaattcaacttactgaagta
ggtaaaaaaattgttgaacaagctaaaaacatagtgaatgaagcagatcgaattcaagat
attgtagatcaagaaaaaggatttgttgggggagagttcagaataggaattatccctaca
gtaatgcctaccctattgccaatgtttttgaacaatttcatcaaaaaatacccaaaagtt
aaactcattatagaagaattaaataccaacgaaataatcactaaactaaaaaatggtcat
ttagatgcagcaattgcagccactccgttagaagaagaaaaaattaaagaagtggtcttg
tactatgaacctttcatggtttacgttcctgaaagtcatagtaaatttaacaaagctgaa
ttagaaattggggatttaaatgtagatgaaattttattactacaagatggtcattgtttt
agagatgggatattaaatctttgtaaaaataaaaatacatctaaagaaaataaatttcaa
ttagaaagtggcagttttgaaacactgatacgattggctaacgaagggttgggcgttact
ttacttccttatttgcatactttagaattatctgataaagagaaattaaaactacgtcat
tttaaagatcccaaaccatcaagagaagttagtttattaatccctaaaaatgaattaaaa
atccatattatagatgctttacgcaatgtaatttcaggagttttaaggggagctattgct
tttcaaaacgttgaaatcattagccctctctcaaaaaaataa
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