Flavobacterium columnare: FCOL_01020
Help
Entry
FCOL_01020 CDS
T01653
Symbol
trpA
Name
(GenBank) tryptophan synthase subunit alpha
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
fco
Flavobacterium columnare
Pathway
fco00260
Glycine, serine and threonine metabolism
fco00400
Phenylalanine, tyrosine and tryptophan biosynthesis
fco01100
Metabolic pathways
fco01110
Biosynthesis of secondary metabolites
fco01230
Biosynthesis of amino acids
Module
fco_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FCOL_01020 (trpA)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
FCOL_01020 (trpA)
Enzymes [BR:
fco01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
FCOL_01020 (trpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
Motif
Other DBs
NCBI-ProteinID:
AEW85053
UniProt:
G8X8B6
LinkDB
All DBs
Position
complement(249865..250626)
Genome browser
AA seq
253 aa
AA seq
DB search
MNRINIKLQENKKLLSLYFIAGYPSLNDTVHIIQELEKNGVDMIEIGLPFSDPLADGPTI
QESSTIALENGMTSALLFEQLATIRQTVQIPLLIMGYLNPILQFGVEKFCQQCAQVGIDG
LIIPDLPLEIYQQEYQTIFEKYGLKNIFLITPQTSDERIRQIDAVSNSFIYMVSTASVTG
SQTGFGEEQMAYFERIAKMQLNNPQVIGFGISDAKTFQHATTHQQGAIIGSAFIKHLTAN
GVDGIGNFIKKIR
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaataaacataaaattacaagaaaataaaaaactcctttccctttattttata
gcgggatatccaagtttaaacgacaccgtacacatcatccaagaactagaaaaaaatgga
gtcgatatgattgaaattggattaccgtttagtgatcctttagccgatggtcccaccata
caagaaagttcgaccatcgccttagaaaacggcatgacttctgccctactatttgagcaa
ttggcaaccattcgtcaaacggtgcaaattccgttattgattatggggtatttgaatccg
atactgcaatttggcgtagaaaaattttgtcagcaatgcgcccaagtaggcattgatggt
ttaatcatccccgatttacctttggagatataccaacaagaatatcagactatttttgag
aaatacggcttaaaaaacatctttttaatcactccgcaaaccagtgacgaacgtattcgc
cagatcgatgctgtttccaatagttttatctatatggtcagtaccgcaagcgttacgggt
agtcaaacgggctttggcgaagagcaaatggcgtattttgaacgaattgctaaaatgcaa
ctcaacaacccacaagtgattggctttggaatttctgatgctaaaacgttccaacatgcc
actacgcaccaacaaggtgccattataggtagcgcgtttatcaaacatttaaccgctaat
ggtgtggatggtattggaaattttattaagaaaatacgataa
DBGET
integrated database retrieval system
