Flavobacterium columnare: FCOL_01305
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Entry
FCOL_01305 CDS
T01653
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
fco
Flavobacterium columnare
Pathway
fco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FCOL_01305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_01305
Enzymes [BR:
fco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FCOL_01305
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FCOL_01305
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
WHD_PriA_bact
Zn_ribbon_PriA
Helicase_C
PriA_C
HTH_65
Cas3-like_C_2
nSTAND3
AAA_19
AAA_30
NPHP3_N
HGD-D
ATPase_2
Zn_ribbon_IS1595
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AEW85110
UniProt:
G8X959
LinkDB
All DBs
Position
317017..319464
Genome browser
AA seq
815 aa
AA seq
DB search
MRYFIEVVIPISLPQTFTYEVSEAEFSFIQIGMRVAVPFGKTKFYTGLTISKHHLAPTLY
EAKEIHQIIDELPIVTTIQIEFWKWIASYYMCSLGEVYKTALPSSLILESETIISTKKEV
LNTSDLSDDEFLIVEALSNQTALKLSEVTAILNKKKVFPVIQSLLDKDILILQEEMIEEY
KPKLVKYIRLVERFDKPNQLEELLQILKNAQKQKQLVLSYFQLIATQKKPIATKDLLLFS
GIAASTLKTLVDKQIFEEYLLQQDRVSFDEVEECQIILSHAQQKAYQEILEALETKDVCL
LHGVTASGKTEVYIKIIEHYLKQEKQVLYLLPEIALTTQLVQRLTKHFGNKIAVYHSRYS
NNERVEVWNHILIDSEKAQVIIGARSALFLPFQQLGLIIVDEEHEQTFKQVDPAPRYHAR
DASIVLAHQLKAKVVLGSATPSLESYYNSQKGKYGLVELFERFGNAVLPEIILVDLKDSY
FRKRMTGHFSQILIDKMQEALYNEEQIILFQNRRGYSPVLECMTCGHIPECPHCDVSLTY
HKFKNQLRCHYCGYNIAKPTNCHVCSSIDLTSKGFGTEQIEMELASLFPSKNIKRMDQDT
TRGKHSFERLIHSFKNREIDILVGTQMLAKGLDFDNVSLVGVLNADNMLYFPDFRAFERS
YQMMTQVAGRAGRSEKKGKVVIQSYNPMHNTIQQVTDHNYLGMYKEQLYERHIYKYPPFY
KLIRLTLKHKEFEKLKEGSMWLYQVLKQSLQMPVLGPEEPPISKIRNEYIRTILIKIPKD
KHLGNTKKTIQKILNSFEAVPIYRSIRVGVNVDVS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcgctattttatagaagttgttatccctatttcgcttccacaaacttttacctatgaa
gtttcggaagcggaattttcttttatacaaatagggatgcgtgttgcagtgccctttggt
aaaacaaaattctacacgggactcaccattagtaagcatcatctagctcctactttatat
gaagctaaagaaattcatcaaattatagatgaattgcctatcgtaacaactattcaaata
gagttttggaaatggatagctagttattatatgtgttctttgggtgaagtatataaaaca
gcattaccatcctcacttatattagaaagtgaaaccataatttcaacaaaaaaagaagtt
ttaaatacgtctgatttatcagatgacgaatttttaatagtagaagcactttctaatcaa
actgccttaaaactatcagaagtaacagctattcttaataaaaagaaagtgtttccagtg
attcaatcgttattagataaagatattttaattcttcaagaagaaatgattgaagaatat
aaacctaaattagttaagtatattcgtttggtagaacgatttgataaacctaatcaacta
gaagaattattgcaaattcttaaaaatgcacaaaaacaaaaacaactagtattaagttat
tttcaactcatagctactcaaaaaaaaccaattgcgactaaggatttattattgttttca
ggaatagcagcgagtactctaaaaactttagttgataaacagatttttgaagaatatttg
ttacaacaagaccgcgtgtcttttgatgaagtagaagaatgccaaataatcttaagtcat
gcgcagcaaaaagcatatcaggaaatattagaagctttagaaactaaagatgtttgttta
ttgcatggggtaactgcatctggaaaaacagaagtctatattaaaattatagaacactat
ttaaaacaagaaaaacaagttctgtatctgctgccagaaatagctttaacgactcaatta
gttcaaagattaacaaagcattttggaaataaaatagctgtttaccattctaggtactca
aataatgaaagagtagaagtttggaatcatatattaatagattctgaaaaagcacaggta
ataataggggctagatcagcgttatttttaccttttcaacaattaggattgattattgta
gatgaagaacatgaacaaacgtttaaacaagtagatccagcaccacgttatcatgcccga
gatgcctctatagtactcgctcatcagttaaaagcaaaagtagttctaggatcagctacc
cctagtttagaaagttattataatagtcaaaaaggaaagtatggtttggtggagcttttt
gaacgatttggaaatgctgttttacctgaaattattttagttgatctaaaagatagttat
tttagaaaaagaatgactggacattttagtcaaatattgattgataaaatgcaagaagct
ttgtataatgaagagcaaattatcctttttcagaatagaagaggttattctcccgttcta
gaatgtatgacctgtggacatattccagaatgcccacattgtgatgtaagtctaacatat
cataaatttaaaaatcaattgcgttgccattattgtggttataacatagcaaaacccacg
aattgtcatgtttgttcaagcattgatcttacctctaaaggttttggaacagagcaaata
gaaatggagttagccagtttatttccctctaaaaatatcaaacgaatggatcaggataca
actcgaggcaaacactcatttgaacgtttgatccatagttttaaaaacagagagatagat
attctagtaggaacccaaatgttagcaaaaggattagattttgataacgtttcactggtt
ggtgtcttaaacgctgataatatgctctactttcctgattttagagcctttgaaagaagt
tatcaaatgatgacacaagtagcaggtagggcaggaagaagtgagaaaaaaggaaaagta
gttatacaaagttataaccctatgcacaatacaatacagcaagttacagatcataactat
ttaggtatgtataaagagcagttgtatgaacgacatatatacaaatatcctcctttttat
aaattaataaggttaactttaaaacataaagaatttgaaaagttaaaagaaggttctatg
tggttgtatcaggtgttaaaacaaagtttgcaaatgccagtactaggtccagaagaacca
ccaattagtaaaattagaaatgaatatattcgaactattttaataaaaataccaaaagat
aagcatttaggtaatacaaaaaaaactatccagaagatactgaatagttttgaagcggta
cctatttataggtctataagagtaggagttaatgtagatgtaagctaa
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