Flavobacterium columnare: FCOL_01705
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Entry
FCOL_01705 CDS
T01653
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fco
Flavobacterium columnare
Pathway
fco03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FCOL_01705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_01705
Enzymes [BR:
fco01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FCOL_01705
DNA repair and recombination proteins [BR:
fco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FCOL_01705
Prokaryotic type
FCOL_01705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEW85190
UniProt:
G8XA26
LinkDB
All DBs
Position
407715..408380
Genome browser
AA seq
221 aa
AA seq
DB search
MEVKIHNSWKEILKEEFNKPYFENLIHFIKNEYSIGRCFPKGNLIFSAFDHCHFEDVKVV
IIGQDPYHGLGQANGLCFSVNEGVSLPPSLINIFKEIESDLKIPMPISGNLERWAEQGVL
LLNATLTVRENTAGSHQNKGWETFTDAVIQQISDEKENIVFLLWGGFAKKKGAKIDRNKH
YVLETGHPSPLSANRGLWFGNKHFSKTNDYLKSINKKEIKW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggaagttaaaattcataattcttggaaagaaattttaaaagaggaatttaataaaccc
tattttgaaaaccttattcactttattaaaaatgaatattcaattggacgttgttttcct
aaaggaaatcttatcttttccgcatttgatcattgccattttgaagatgtaaaggtagtt
ataataggtcaagatccttatcatggtttaggacaagctaatggattatgtttttctgtg
aatgaaggggtttctcttcctccttcattaattaatattttcaaagaaattgaatcagat
ttaaaaattcctatgcctatttctggaaatttagaacgttgggctgaacagggtgtttta
cttttaaatgcaactttaacagttagagaaaatacagctgggagtcatcaaaataaagga
tgggaaacatttacagatgccgttattcagcagatttctgatgaaaaagaaaatattgtt
tttttgctttggggtggatttgctaagaaaaaaggagcaaaaatagatcgaaacaaacat
tatgttttagaaacagggcatccttcacctttaagtgctaaccgaggattatggtttggt
aataagcattttagtaaaacaaatgattatttaaagagtatcaataaaaaagaaataaaa
tggtaa
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