Flavobacterium columnare: FCOL_03225
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Entry
FCOL_03225 CDS
T01653
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
fco
Flavobacterium columnare
Pathway
fco03030
DNA replication
fco03410
Base excision repair
fco03420
Nucleotide excision repair
fco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCOL_03225
03410 Base excision repair
FCOL_03225
03420 Nucleotide excision repair
FCOL_03225
03440 Homologous recombination
FCOL_03225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fco03032
]
FCOL_03225
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_03225
Enzymes [BR:
fco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCOL_03225
DNA replication proteins [BR:
fco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FCOL_03225
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FCOL_03225
NER (nucleotide excision repair)
GGR (global genome repair) factors
FCOL_03225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
RNase_H_2
HHH_5
HHH
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
AEW85490
UniProt:
G8X579
LinkDB
All DBs
Position
complement(749057..751891)
Genome browser
AA seq
944 aa
AA seq
DB search
MSTQKRLFLLDAYALIFRGYYAFIKNPRINSKGLDTSAIIGFMNSLMDVIKREKPDHLAV
AFDKGGSNYRLEMFTEYKANRDETPEAIKIAIPYIQEILNAMHIPIIEIAGYEADDLIGT
LAKKAEKQGYLVYMVTPDKDFGQLVSENIFMYRPARAGNDIEIWGVEEIKAKFEVQDPLQ
VIDFLGMMGDAVDNIPGLPGVGEKTAKKLLAEYGSMENLLANTSKLKGKMKENIENNKEK
GILSKKLATILLDCPVEFDEQSFELSKPDIEKTDTLFQELEFRQMKAQFDKLFGGGKEYD
EIDTADSVSKKNAKKTPENQMDLFGFSDQEENESISGFQYANLDNTSHFYQIVNGNLPIN
LLLQNLLQQTAVCFDTETTGIDTTNAELVGLAFSWEKGKGFYVPFPENQKETKELIHKFK
PFFENNSITKIGQNIKYDLKILANYKIEIKGPLFDTMIAHYLINPDMRHNMDVLSETYLQ
YSPKSIETLIGKKGKNQLSMRQVALEDIKEYAVEDADITYQLKEHFQPILERVGTKKLFD
EIEIPLVQVLADMEREGINLDQEFLKSMSTDMQKEIETIENQIYEQAGEKFNLASPKQLG
DILFEKLQIGGTKQKKTKTGQYATGEEVLSYLANDHKIVQDILEWRQLVKLKSTYVDALP
QQINNKTARVHTDYMQTVAATGRLSSNNPNLQNIPIRTERGRQIRKAFIARDENHTLLSA
DYSQIELRIIAALSGEDTMISAFQNNEDIHKSTAAKVFNVPLDEVTKEQRSNAKTVNFGI
IYGVSAFGLSNQTSLSRKESAELIDAYYKTYPKLKSYITSQIDFARENGYVETISGRRRY
LKDINSANAVVRGAAERNAVNAPIQGSAADIIKIAMINIHERLKEENYQSKMLLQVHDEL
VFDVHNSELEKIKPMIKKEMENAFRLAVPLEVEIGLGKDWLEAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacacaaaaacgtttatttctactcgacgcttatgctcttatttttagaggttat
tatgcttttattaaaaaccctagaattaactctaaaggactagacacttcagccattatt
ggctttatgaattccctaatggatgttatcaaacgcgagaaacccgatcatttagccgta
gcatttgacaaaggaggtagtaattatcgtttagagatgtttaccgaatacaaagctaat
cgtgacgaaactcctgaggcgattaaaattgctatcccttatatacaagaaatcctaaac
gctatgcatattcctattatagaaattgcaggttatgaagccgacgatttaataggcaca
ttagctaaaaaagccgaaaagcaaggatatctagtttatatggttacaccagataaagat
tttggccaattagtttccgaaaacatcttcatgtatcgtccagcacgtgctgggaacgat
attgaaatatggggagtagaagaaataaaagcaaaatttgaagtacaagaccctttgcaa
gtaatcgactttttaggtatgatgggagatgcagtagacaacattcctggcctacctggc
gtaggtgaaaaaacagcaaaaaaactactcgctgaatacggttctatggaaaatctttta
gccaacacaagcaagctaaaaggaaaaatgaaagagaacattgaaaacaacaaagaaaaa
ggaatcctttctaaaaaactagccactatactacttgattgtcctgtagaatttgacgaa
caaagttttgaactttctaaacctgacatagaaaaaacagatactttatttcaagaatta
gagtttcgccaaatgaaagcccaattcgacaaactatttggaggcggaaaagaatatgac
gaaatagacaccgctgactctgttagcaaaaaaaacgcaaaaaaaacgcctgaaaatcaa
atggatttatttggtttttccgatcaggaagaaaacgaatctatatccggttttcaatac
gcaaatctggataacacatctcatttttatcaaatagtaaatggcaacctacccattaat
ttattactacaaaacttactacagcaaacagccgtctgttttgataccgaaactacaggt
atagacaccactaatgctgaattagtaggccttgccttttcatgggaaaaaggcaaagga
ttttacgtgccatttcctgaaaatcaaaaagaaactaaggaattaatccataaattcaaa
cctttttttgaaaataattctattaccaaaataggacaaaacatcaaatacgacttaaag
attttagccaattacaaaattgaaataaaaggtcctttgtttgatactatgatcgctcat
tatttgattaatcctgatatgcgtcataatatggatgtcttatccgaaacctatttacag
tacagtcctaaatccattgaaactttaattggaaaaaaagggaaaaatcaactatcaatg
cgccaagtagcattagaagacattaaggaatacgccgtagaagatgctgatatcacatat
caactaaaagaacacttccaacctattttagaacgagtaggaactaaaaaattattcgac
gaaatagaaattccattagtacaagttttagcagacatggaacgagaaggcatcaaccta
gaccaagaatttttaaaatctatgtctacagatatgcaaaaagaaatcgaaaccatagag
aatcaaatatacgaacaagcaggtgaaaaatttaatttagcctcacccaagcaactagga
gatattttatttgagaaacttcaaattggaggaacaaaacaaaaaaaaaccaaaacagga
caatacgctacaggtgaagaagtcctaagctaccttgctaacgatcataaaatagtacaa
gatattttagaatggcgccaacttgtaaaactaaaaagtacttatgtagacgcgcttccc
caacaaattaacaacaaaacagctcgtgttcatactgactatatgcaaactgtagctgct
acaggaagattaagttctaacaatcctaacttacaaaatatccccattagaacagaaaga
ggtcgtcaaatccgcaaagcatttattgcccgtgatgaaaaccacacccttctttctgcc
gattattcacaaattgaattacgtattatagcagcactttctggagaggatactatgatt
tctgcttttcaaaacaacgaagatatacacaaaagtactgctgcaaaagttttcaacgtt
ccactagatgaagtaacaaaagaacaacgcagcaatgcaaaaacagttaacttcggtatc
atttatggcgtttcagcttttggtttaagcaatcaaacttcattatcaagaaaagaaagt
gccgagctcattgacgcttattacaaaacctaccctaaattaaaatcatacattacaagt
caaattgattttgctcgtgaaaacggttatgtagaaaccatatcaggccgtcgtcgttat
ttaaaagatattaattcagctaacgctgtagttcgaggagcagcagaacgaaatgcggta
aacgcccctatccaaggaagtgcagccgatattattaaaatagccatgattaatatccat
gaacgcttaaaagaagaaaactaccaatcaaaaatgttgcttcaggttcatgacgaatta
gtatttgatgtacacaattccgaactagaaaaaatcaaacccatgataaaaaaagaaatg
gaaaacgcctttcgactggcagttcctctagaagtagaaataggtttaggtaaggattgg
ctagaagcgcattag
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integrated database retrieval system
