Flavobacterium columnare: FCOL_04420
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Entry
FCOL_04420 CDS
T01653
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
fco
Flavobacterium columnare
Pathway
fco03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
FCOL_04420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_04420
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
FCOL_04420
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
ATPase_2
AAA_29
DUF621
Motif
Other DBs
NCBI-ProteinID:
AEW85715
UniProt:
G8X7K2
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Position
complement(1038042..1040666)
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AA seq
874 aa
AA seq
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MSVKAKTPKETPLMKQYNEIKAKYPDACLLFRVGDFYETFGEDAVRTARILGITLTKRGS
GTESETALAGFPHHSLNTYLPKLVKAGLRVAICDQLEDPKMTKTIVKRGVTELVTPGVSM
NDEVLMSKSNNFLASVYFGKKQLGVAFLDVSTGEFLTSEGNADYVDKLLQNFNPSEILVP
KQNKKEFVGLFGENFHAFYLEDWVYKQDYATESLINHFQTNSLKGFGIEELEHGVIASGA
ILYYLSETQHNKIQHITSIHRIAEDAYVWMDRFTIRNLELYHSYNPNAVTLLDVIDRTLS
PMGGRLLKRWLALPLKDINKIKGRHEVVGYFKDNQDLLCQVQQQIKQISDLERLISKVAA
GRVSPRELVYLKDSLDAIEPVKTLALKSTQEAVKVIGDSLHACELLREKISNTLNPDAPV
AINKGNAIALGVNEELDELRNISSSGKEFLEAIEKRESEKTGIPSLKISFNNVFGYYIEV
RNTHKDKVPSEWIRKQTLVNAERYITEELKEYESKILGAEEKIHQLEMSLFEQLVTWVAT
YIKPVQHNANLIAQLDCLTSFAQQAIENNYVCPEINDTYVLDIKNGRHPVIEKQLPIGVP
YIANDVYLDRDLQQVVMITGPNMSGKSAILRQTALIVLLAQMGSFVPAEAVTMGVVDKIF
TRVGASDNISMGESTFMVEMNETASILNNISNRSLVLLDEIGRGTSTYDGVSIAWAIAEF
LHENPAQPKTLFATHYHELNEMTETLTRIQNYNVSVKELKDNVLFIRKLEKGGSAHSFGI
HVAKMAGMPQTVIQRAGKILKKLEKNHSSEVLNGKTAQGNLGNEEEEMQLSFFNLDDPLL
QEIKEEIQNLDINTLTPVEALMKLNEIKRMLAKK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagtaaaagctaaaacacctaaggaaactcctctaatgaagcagtataacgagatt
aaggctaaatatccagatgcttgtttgttgtttagagtgggtgatttttacgaaaccttt
ggagaggatgctgttcgcacagctcgtattttaggaatcactttaacaaaaagagggagt
ggaacagaaagtgaaacggccttggcggggtttccacatcactctttaaatacgtatttg
ccaaaattggtaaaggcgggtttacgtgtggctatttgtgatcagttggaagatcccaaa
atgaccaagactattgtaaaacgcggagtaacagagttagttactcctggtgtttctatg
aatgatgaggtgttgatgtctaaatctaataactttttggcttctgtttattttggtaag
aaacaattaggtgtggcttttttagatgtatcaacaggcgagtttttaacttctgaagga
aatgcggattatgtagataaattattgcaaaattttaatccaagtgagattttagttcct
aagcagaataagaaagaatttgtaggactttttggtgaaaattttcacgccttttatctt
gaagattgggtatacaaacaagactatgcaactgaaagtttgattaatcattttcaaacc
aattctctaaaaggttttggaatagaagagttagagcatggtgttattgcttcaggagct
attttgtattatttatccgaaacccaacataataaaattcagcatataacctctattcac
cgcattgcagaagatgcttacgtttggatggatcgttttactattcgtaatttagagtta
tatcatagttataatcctaacgctgttaccttgttagatgtaatagatcgtactctttct
cctatgggaggacgcttgttaaaacgatggttagctcttccgctaaaagatataaataag
attaaaggacgccatgaagtagttggttattttaaagataatcaagatctattgtgtcaa
gttcaacaacagattaagcagatatcagatctagaacgtttgatatctaaagtggcagct
ggaagagtttcgccaagagaattagtgtatttaaaagattctttagatgctattgaacca
gttaagacacttgctttaaaaagcactcaggaggcggtgaaagtaataggggatagtttg
catgcttgtgaattgctaagagaaaaaattagtaatacactaaatccagatgcaccagtg
gcaattaataaaggaaatgccattgcgctaggagtaaatgaagaattagatgaattacga
aatatttcaagttcagggaaagagtttttggaagcaatagaaaaaagagaatctgaaaaa
accggtataccatctttgaaaatttcttttaataatgtttttggatattatatagaagtt
cggaatacacataaagacaaagtgccttcagagtggattcgtaagcaaacattggtaaat
gcagaacgctatataacagaggaattaaaagaatacgaatcaaaaatattaggagccgaa
gaaaaaattcatcaattagaaatgtctttgtttgaacagttagtaacttgggttgcaacc
tatattaagcctgttcagcataatgctaacctcattgctcagttggattgtttgacttcg
tttgcgcaacaagcaattgaaaacaattacgtgtgtccagaaattaacgatacgtatgta
ttagatataaaaaacggacgccatccagttattgaaaaacaattgcctataggagtgccg
tatatagccaatgatgtgtatcttgatcgagacctccaacaagtggttatgattacaggg
cctaatatgtcaggaaaatcagctatactaagacaaacagcgcttattgttttattggca
caaatggggagttttgtacccgctgaagccgtaactatgggcgtggttgataagatattt
acgcgtgtgggagctagtgacaatatatctatgggggagtcaacctttatggtggaaatg
aatgaaaccgcatcaatcctaaataatatatccaatagaagcttagttttgttggatgaa
atagggagaggaacgagtacgtatgatggtgtgtctattgcatgggctattgcagagttt
ttacatgaaaatccagcacaacccaaaacactttttgctactcattatcatgaacttaat
gagatgacagaaacgttaactcgaattcaaaactataatgtgtctgtaaaagaattaaaa
gacaatgtgctatttatccgtaaattagaaaaaggaggaagtgcgcatagttttggtatt
cacgtggctaaaatggctggaatgccgcaaacagttatacaaagagcgggtaagattcta
aaaaaattagaaaaaaatcattcttcggaggttttaaacggtaaaacagcacaagggaac
ttaggcaatgaagaagaagaaatgcaactaagtttttttaatttagatgatcctttgttg
caagaaataaaagaagaaattcagaatttagatattaataccttgactcccgtagaagct
ttaatgaaactaaatgaaatcaagcgtatgcttgcaaaaaaataa
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