Flavobacterium columnare: FCOL_04680
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Entry
FCOL_04680 CDS
T01653
Name
(GenBank) endonuclease V
KO
K05982
deoxyribonuclease V [EC:
3.1.21.7
]
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_04680
Enzymes [BR:
fco01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.7 deoxyribonuclease V
FCOL_04680
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
FCOL_04680
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Endonuclease_5
Motif
Other DBs
NCBI-ProteinID:
AEW85767
UniProt:
G8X8D3
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All DBs
Position
1119331..1120614
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AA seq
427 aa
AA seq
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MMEKLYPQDDFEKFIIDDENKGLLKNNNKLFSGIRETFSDEIGYYGRDKFCNGVPHGIYF
SNRLNDNKISRSIHIYIYGEDRFCFTFSNLDCNISIYNLSYQNDILIDDFYCKNGNKGYN
AKFSELFSKDDLDYNKLLVENQDIIDEYFEIQYDIYSIGTFIDVSRDKAQYTKVLNAYLV
SMDMQKYLGKTIPDTFMEKFVWQEEQIGKTINEDQLSTDVQFIGGVTVAYHDITQVIVAV
ITVMNVNSQEIVDQAIYTEDKITMHIPDVFGFNETVWAIKAFEKLTIKPQLIFCDGHGIE
HPKNMGLATFLGIQLDIPTIGCAKKRLVGYYKKEDLGDKRADRIELIFDQKVVGKALRTK
ENTNPIYVSIGHKISLETSVNWVLETTQSTRLPFVLEKAIEIARQQLPEQFRIDFMNDEL
NQYGIIK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaaaattatatccacaagatgatttcgaaaaatttatcattgatgatgaaaat
aaaggactgttgaaaaataataataaattgttttcaggtatcagagaaaccttttcggat
gaaatagggtattatggaagggataaattttgtaatggtgtgcctcatggaatttatttt
agtaatcgcttaaatgataataaaatatctagaagcatacatatatatatatatggagag
gataggttttgctttacatttagcaacttagattgtaatatctctatttataacctaagt
taccaaaatgatattttgattgatgatttctattgtaaaaatgggaataaaggatataat
gctaaatttagtgaacttttttcaaaagatgatttggattataataaattacttgtagag
aatcaagatattatagatgaatatttcgaaattcaatatgatatttatagtataggaact
tttatcgatgtgtctagagataaagctcaatatactaaagtactgaatgcttatcttgtt
agtatggacatgcaaaaatatctaggaaaaacaattcctgatacatttatggaaaagttt
gtgtggcaagaagaacaaattggtaaaacaataaacgaggatcaactgtcaactgatgtg
caatttattggaggagtaacagtagcttatcacgatattacccaagtaattgtagccgtt
atcacagttatgaatgtaaatagtcaagaaatcgttgaccaagcaatttatactgaggac
aagatcactatgcatattccagatgtttttggttttaatgagaccgtttgggcaattaaa
gcatttgaaaagttaactataaaaccccaacttattttttgtgatggacacggtattgag
catcctaaaaatatgggcttggcaacttttttgggtattcaactggatatacctactatt
ggttgcgccaaaaagcgtcttgtagggtattataaaaaggaagatttaggggataaaaga
gcagatcgtatagaacttatatttgaccaaaaagtagttggaaaagccctccgaacaaaa
gaaaatacaaacccaatatatgtttctataggacataagatttctttagagacaagtgta
aattgggtgttagaaacaacgcaatcaacaagacttccttttgtacttgaaaaggcaatt
gagattgctcgccaacagttgccagagcaattcagaatagattttatgaacgatgaactt
aaccaatacggaattataaaatga
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