Flavobacterium columnare: FCOL_05710
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Entry
FCOL_05710 CDS
T01653
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
fco
Flavobacterium columnare
Pathway
fco00260
Glycine, serine and threonine metabolism
fco00460
Cyanoamino acid metabolism
fco00630
Glyoxylate and dicarboxylate metabolism
fco00670
One carbon pool by folate
fco00680
Methane metabolism
fco01100
Metabolic pathways
fco01110
Biosynthesis of secondary metabolites
fco01120
Microbial metabolism in diverse environments
fco01200
Carbon metabolism
fco01230
Biosynthesis of amino acids
fco01240
Biosynthesis of cofactors
fco04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FCOL_05710 (glyA)
09102 Energy metabolism
00680 Methane metabolism
FCOL_05710 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FCOL_05710 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FCOL_05710 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FCOL_05710 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FCOL_05710 (glyA)
Enzymes [BR:
fco01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FCOL_05710 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AEW85967
UniProt:
G8XAA9
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All DBs
Position
1325898..1327172
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AA seq
424 aa
AA seq
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MLRDEQIFDLILDEQDRQIHGIELIASENFVSDQVMEAAGSCLTNKYAEGYPGKRYYGGC
EVVDVVEQIAIDRAKALFGAAYVNVQPHSGSQANTAVFAACLQPGDTILGFDLSHGGHLT
HGSPVNFSGKLYNPVFYGVDQETGMLNYDTIQEIATKEQPKIIIAGASAYSRDMDFKRFR
EIADSVGAILMADISHPAGLIAKGLMNDPIPHCHIVTTTTHKTLRGPRGGMIMMGQDFPN
PWGYTTPKGEVKMMSNLLDMAVFPGNQGGPLMHIIAAKAVAFGECLSDEFFTYAMQVQKN
AKAMAEAFIKRDYNIISGGTDNHMMLIDLRNKGITGKEAENVLVKAEITVNKNMVPFDDK
SPFITSGIRVGTPAITTRGLVEADMDKIVELIDRVLMNHTNEEVLEEVANEVNEMMSERA
MFVF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgttacgcgacgaacaaatattcgatttaattcttgatgaacaagatagacaaattcac
ggtattgaattaattgcttctgagaattttgtaagcgaccaagtaatggaagcggcaggt
tcttgtttaactaataaatatgcagaaggttacccaggtaaaaggtattatggaggttgt
gaagtagtagatgtggtagaacaaattgctattgatagagcaaaagctttgtttggagca
gcgtatgtaaatgtacaacctcattcaggatctcaagctaatacagccgtttttgcagct
tgtttacaaccaggagacacaattttaggttttgatttatcacatgggggacatttaacg
cacggatctccggtgaatttttcaggaaaattatacaaccctgttttttatggagtagat
caagaaacaggaatgttaaattatgatacaattcaggaaatagctacgaaagaacaacct
aaaataattatcgcaggtgcttccgcttattctcgtgatatggactttaaacgttttcgt
gaaattgcggattctgtaggtgctattttaatggcagacatttctcacccagcagggtta
atagcaaaaggattaatgaatgacccaattcctcattgccatattgtaacaaccactact
cataaaacattacgtggtcctcgtggaggcatgatcatgatgggacaagattttccaaac
ccttggggctatacaacccctaaaggagaagtaaagatgatgtctaacttattagatatg
gctgtttttccaggtaatcaaggaggccctctaatgcacattatagctgctaaagcagtt
gcttttggtgaatgtttatcagatgagttctttacttatgcaatgcaagtacaaaaaaat
gcaaaagcaatggcagaagcatttataaaaagagactataacattatatcaggtggaaca
gacaatcacatgatgttaatagatttgcgtaataagggaataacaggaaaagaagctgaa
aatgtattagtaaaagcagagattacagtaaataaaaatatggttccttttgatgataaa
tcaccttttataacctcaggtattcgtgttggaacacccgctattacgactcgtggtcta
gtagaagcggatatggataagatcgtagaactgatagatcgtgtattgatgaatcataca
aacgaagaagttcttgaagaagttgctaatgaagtaaacgaaatgatgagcgagcgagct
atgttcgttttttaa
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