Flavobacterium columnare: FCOL_06825
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Entry
FCOL_06825 CDS
T01653
Name
(GenBank) bifunctional preprotein translocase subunit SecD/SecF
KO
K12257
SecD/SecF fusion protein
Organism
fco
Flavobacterium columnare
Pathway
fco02024
Quorum sensing
fco03060
Protein export
fco03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
FCOL_06825
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
FCOL_06825
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCOL_06825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fco02044
]
FCOL_06825
Secretion system [BR:
fco02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
FCOL_06825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
AEW86186
UniProt:
G8X5F4
LinkDB
All DBs
Position
complement(1588760..1591726)
Genome browser
AA seq
988 aa
AA seq
DB search
MQNRGLIKFFAIIFALVSIYQLTFTFIANKVKSDAKAFANGNQEKEIKYLDSIGKQKVFS
LGFTDFTYNEVADKQINKGLDLEGGINVTLQISVKDVLKGLANNTSNALFNKALADAKKN
QQGNQSFLDAFFEAFEKASAGSGIKLASPDVFGNRNLADEINFNMSDSQVKAVIAKKVDE
SVQSAFGVLRERIDKFGVTQPNIVKLGNTGRILVELPGAKDVDRAKKLLSSTAQLEFWET
YKVEEVASYLMTVNEALKKTEKVEPAVKETKSSSKLNDLLVDKSKDSASNAKGNNPLFDK
LMPLQQGGSIIGMIATKDTATVNAYLKRTDIKSLLPANLADVKFLYGKVKDEEAEAVEVY
AIKGNRTNVPPMSGSVLIDAADTFDQMGKPAVSMQMNGKGAKIWEELTGRVFSQKNAIAI
VLDDVVYSAPGVTSGPIAGGRSEISGTFKIDETKDLANVLRAGKLPAAAEIVQSEVVGPS
LGQKAIDNGTMSAIVGLLAVMLWMWVYYGKSGTYANIALVVNLLFLFGILASLGAVLTLP
GIAGIVLTLGTAVDANIIIYERAKEELRHGLNLGDAVQKSFSWTGAMRSIIDANVTHVLT
GAILYTFGTGPIKGFATTLLIGIVTSLFTSIFITRIFLDRAVAKNITLSFTTDWSKNWFT
GYHFDFLKIKKFTYGFSLVVTIISLVSIFFVNGLDQGVDFVGGRTFQVKFEKPVDAAVVS
EELGKVFGVPAEAKVFGDSDQLRITTKYKIEEEGVAVDEEVNKLLYQGLSKYFPGMDYKT
FITLTDGKKLAVLSGSKVGAAISNDIKTNSFWAVIGAMLVVGLYLVISFRKLGYSLGAVA
AVAHDVIFVLGIYSICYKFMPFHMEMDQHFIAAILTVIGYSMNDTVIVFDRIREFLAGNL
KGNFNHIVNESINTTLSRTINTSLTMILVLAIMFVFGGESIRGFIFAMLIGIIVGTYSSL
FIATPVLVDTLSKKDKEEIEKRHAEMNA
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgcagaatagaggactcattaagttttttgcaatcatctttgctttagtaagtatttac
cagcttactttcacttttatagcgaataaagttaaaagtgatgcaaaagcatttgcaaat
ggaaatcaagaaaaggagattaagtatcttgattcaattggtaaacaaaaagtttttagt
ttagggtttactgattttacttacaatgaagtagctgataagcaaattaacaaaggttta
gacttagaaggagggattaacgttaccttgcaaatctctgtgaaagatgtattaaaaggt
ttagctaataatacatcaaatgctttattcaataaagctttagcagatgctaagaaaaat
caacaagggaatcaatcttttctagatgctttttttgaagcatttgaaaaagcttcggct
ggttcaggaattaaattagcttctcctgatgtttttggaaatagaaacttagccgatgag
attaacttcaatatgtcagattcacaagtaaaagctgtaattgctaaaaaagtagatgag
tctgtgcaaagcgcatttggagtattacgtgaacgtattgataaatttggtgttacacaa
cctaatattgttaaattaggaaatacaggacgtattttagtggaattgccaggagcaaag
gatgtagaccgtgctaaaaaattgttatcttctacggctcaattagagttttgggaaact
tacaaagtagaggaagtagcctcttacttaatgactgtaaatgaggctttgaagaaaact
gaaaaagttgaaccagctgttaaagaaactaaatcatcttcgaaactaaatgatttatta
gttgataagtcaaaagattcagcaagtaatgcaaaaggaaataatccattgtttgacaaa
ttaatgccattacagcaaggaggttctataataggcatgattgcaactaaagatacagca
acagttaatgcttatttaaaaagaacggatataaaatctttattacctgccaatttagca
gatgttaagtttttatacggtaaagtaaaagacgaagaagcagaagcagttgaggtatat
gctattaaaggaaatagaacaaatgtgcctcctatgagtggaagcgttttaatagatgct
gctgacacttttgatcaaatgggaaaaccagccgtatctatgcaaatgaacggtaaaggg
gctaaaatttgggaagaattaacaggtagagtattttctcaaaagaatgcaattgctatc
gttttagatgatgttgtatattctgcacctggtgtaacttcagggcccattgcaggagga
cgttctgaaatttcaggaacttttaaaattgatgaaacaaaagatttagctaatgtttta
cgtgctggtaaattacctgccgctgcagaaattgttcagtcagaagtagtaggaccatca
ttaggacaaaaagctattgataatggtactatgtctgctattgtgggattattggctgtt
atgttgtggatgtgggtatattatggtaaatcaggaacttatgcaaatatagcactagta
gttaacttattgttcttgtttggtattttagccagtttaggtgctgtattaacattgcca
ggtattgcaggtattgtactaacattgggtacagctgtagatgccaatatcattatttat
gaaagagcaaaagaagaattacgacatggtttaaatttaggtgatgcagtacaaaaatca
ttctcttggacgggtgctatgcgttctatcattgatgcaaacgtaacacacgttttaacg
ggtgctatcttatatacttttggaacaggacctattaaaggttttgctaccacgttatta
atcggtatcgtaacttcattatttacgtctatttttattacaagaattttcttggataga
gcagtggctaaaaatattactttatcatttactacagattggtctaaaaattggtttaca
ggatatcatttcgatttcttaaaaattaaaaaatttacctatggtttctcattagtggtg
actataatcagtttggtttcaattttctttgtaaatggtttagatcaaggggtagacttt
gttggaggtagaacttttcaagtgaaatttgaaaaaccagttgatgcagccgtagtgtcg
gaagaattaggaaaagtatttggtgtacctgccgaagctaaagtatttggtgattcagat
caattaaggattacaactaaatataaaatagaagaagaaggcgtagctgtagacgaggaa
gtcaataaattattataccaaggattgtctaaatatttccctggtatggattataaaaca
tttattaccttaacagatggtaaaaaactagctgtattatcaggatcaaaagtaggtgct
gctatttctaatgatattaaaacaaactctttttgggctgttattggagcaatgttagta
gtaggtttatacttagtaatttcattccgtaaattaggatattcactaggagcagtagca
gcagtagcacacgacgtaatttttgtattaggtatttattctatatgttataagtttatg
cctttccacatggaaatggatcaacactttattgcagctatcttaacagttattgggtac
tcaatgaatgatacagttattgtatttgaccgtattcgcgagttcttagcagggaactta
aaaggaaactttaatcatattgtaaatgaatctattaatactactttatcaagaacaatc
aatacatcattgactatgattttagtattagctattatgttcgtatttggtggtgagtct
atcagaggatttatctttgctatgttgataggtattattgtaggtacttattcttcatta
ttcattgcaacacctgtgctagtagatactttgtctaaaaaagataaagaagaaatagaa
aaaagacacgcagaaatgaatgcttaa
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