Flavobacterium columnare: FCOL_07385
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Entry
FCOL_07385 CDS
T01653
Name
(GenBank) thiol-activated cytolysin
KO
K11031
thiol-activated cytolysin
Organism
fco
Flavobacterium columnare
Pathway
fco02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FCOL_07385
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
fco02042
]
FCOL_07385
Bacterial toxins [BR:
fco02042
]
Type II toxins: Membrane damaging toxins
Pore-forming toxins, Beta-pore-forming/Cholesterol-dependent
FCOL_07385
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Gene cluster
GFIT
Motif
Pfam:
Thiol_cytolysin
Nakanori
TnpV
Motif
Other DBs
NCBI-ProteinID:
AEW86296
UniProt:
G8X666
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Position
complement(1713805..1715481)
Genome browser
AA seq
558 aa
AA seq
DB search
MNFLKPNARLALLLVMQMSVLSCNNEDVVTNESPKESQALNDKGIYAGPKTELKISRRIL
SPSSNERGYSSCKTIEERYDKTFENFSKLGGGAHLLWPGNIVQGGTIVSGNLASIPIDGT
GRNSIEVKVDAFSASSSKPSSMNVENPTAGKVQGALEKILDGYYESGTKFPANYAVEIQR
TYDSKQLQVAVGVGYTGPAAGLSASLGINFKKNKTYYAVTLKQKFFNVSVLAKPGLQGDF
GWIKKEYPRSEFDKYIGEKNPAAYISSVTYGRLYTLVYESDESSFEMEQALNFAYKNPAA
NITAEQKLRYASTFQNTKVYAKQLGGSATGGLDSAFGAFAGNFEKVRDFVVNGAEVSKQN
PGYPIEYTAVNIESNLDVTINVNGVSNYSECEETLYTAKTYDEAKKAVDKLKSDYGIANC
AKIIIFNNTDREIVLKNYTPWYGSYFYNTPPTSIPVKKYGYVLAVHKTGASTGTFNQIAY
TIDDKTVSFGTYAPWDQFRTNNVLVDFKEITESELYNNSVRPSIEKLQGPFRVRGTIATG
DAPYVNFEVNGKGNSYIN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaattttttaaaaccaaatgctagattggcattactactagtaatgcaaatgtccgtt
ttaagttgtaacaacgaagacgttgtgaccaatgaatccccaaaagagagtcaagctctt
aatgacaaagggatttatgctggtcctaaaacagaattaaaaattagtagaagaatcctt
tctccatcatcaaatgaaagaggctattcaagctgtaaaacgattgaagaacgctatgat
aagacatttgaaaatttttcaaaattaggaggaggagctcatttgctgtggccaggaaac
attgtgcaaggaggaactattgtatcaggaaatctagcgtctattcctattgatggaaca
ggaagaaattcaattgaagtaaaagtagatgctttttcagcaagttcatcaaaaccttca
agcatgaatgtagaaaatccaacggcaggaaaagtacaaggagccttagaaaaaatacta
gatggatactatgaatcaggaacaaagtttcctgctaattatgctgttgaaattcagaga
acctacgatagcaagcaattacaagtagccgtaggggttggttatacaggaccggcagca
ggtttgtcagcgagtttgggaataaactttaagaaaaacaagacttattacgctgttacg
cttaaacaaaaattctttaatgtatcagtattagcaaaaccaggacttcaaggcgatttt
ggttggataaaaaaagagtatccaagatctgaatttgataaatatataggagaaaaaaat
ccagctgcctatatatcatctgtaacctatggtagattatatactttagtttacgaatcc
gatgaaagttcttttgaaatggaacaagctttaaactttgcttataaaaatccagctgca
aacataacagccgagcaaaagttaagatatgccagtacatttcaaaatacaaaagtatat
gcaaaacagttaggaggtagcgcaactggtggattagattcagcatttggggcttttgca
ggaaattttgaaaaagtaagagactttgtggtgaatggagcagaggtttctaaacaaaac
ccaggatacccaatagaatatactgctgtaaatattgaatcaaaccttgatgttactatt
aatgttaatggagtatcaaactactcagaatgtgaagaaactttatacacagcgaagact
tatgatgaagctaaaaaagcagtggataaactaaaatcagattacggtatagctaattgt
gccaaaattatcatattcaataatacagatagagaaattgtattaaaaaattatactcct
tggtatggtagttatttttacaatacaccaccaacctctattccagtaaaaaaatacgga
tatgttttagcagttcataaaacaggagcgtcaacaggtacatttaaccaaatagcatat
actatagatgataaaacagtaagttttggaacctatgcaccttgggatcagtttagaacc
aataatgttttagttgattttaaagaaataacagaatcagagttatacaataatagtgta
cgtccttctattgaaaaactacaaggcccttttagagtaagaggtactattgcaacagga
gatgctccttatgtgaattttgaagttaatggaaaaggaaatagttatataaattaa
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