Flavobacterium columnare: FCOL_07400
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Entry
FCOL_07400 CDS
T01653
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_07400
Enzymes [BR:
fco01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FCOL_07400
DNA repair and recombination proteins [BR:
fco03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FCOL_07400
Prokaryotic type
FCOL_07400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AEW86299
UniProt:
G8X669
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All DBs
Position
complement(1716405..1717691)
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AA seq
428 aa
AA seq
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MTIFWYRRDLRVEDNAALYFALQENQSVLPIFIFDTTILNQLEKTDARVSFIHEQLQYIN
RQLKAVNKSLAIFYGNPVEIFSELITKHKIENVYTNHDYEPAARKRDKAINELLKSHQVA
FKTCKDQVIFEKTEILKNNQTPYVVYTSYSKKWKENLNTIQLPYYPSEKLIHKIIPHNYP
FLSLKDISFKPTTIVFPKYNISDALITHYEATRNYPSLPGTSLLSIHLRFGTLSIRKLVE
YVRTFENPTFLNELIWREFFMQILWHFPHTVHKSFKDKYDHIPWENNELFFQKWCQGQTG
YPFVDAGMRELNATGHMHNRVRMIVASFLCKHLLIDWRWGEAYFATKLLDYEQSSNVGNW
QWAAGSGVDAAPYFRIFNPTEQIKKFDPNLQYIKKWIPELETPQYPKPMVDHKIARERCL
TTYKTIVG
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacaattttttggtacagaagagatttacgagtagaggacaacgcagccttatacttt
gctttgcaagaaaaccagagcgtattacctatttttatttttgatactactattttaaat
caattagaaaaaacggatgctcgggtttcgtttattcatgaacaattacaatatattaac
aggcagcttaaagcagtaaacaagtctttagctattttttatggcaatccggtagaaatt
ttttcagaacttataacaaagcataaaattgaaaatgtttatacaaatcatgattatgaa
ccagccgcccgaaaacgagataaagccattaatgaactactaaaatcacaccaagtagcc
tttaaaacgtgtaaggatcaagttatttttgaaaaaacagaaatattaaaaaacaatcaa
acaccttatgtggtttatacatcctattctaaaaaatggaaagaaaacttaaatacaata
caattaccatattacccctctgaaaaattaatacataaaataataccacataattaccct
tttttaagtttaaaggacattagttttaagcctactactattgtattccccaaatataat
atttcagatgcgttgataacccattacgaagccactcgtaattatcccagtttaccagga
acctcattattaagcattcatttgcgttttggaactttaagcatacgaaaattagtagaa
tatgtgcgcacctttgaaaacccaacgtttctaaacgaactgatttggagagaatttttt
atgcaaattttgtggcattttcctcatacagttcacaagagtttcaaggataaatatgat
catataccatgggaaaataatgagcttttttttcaaaaatggtgtcaaggacaaacaggt
tatccttttgtagatgcaggtatgcgagagcttaatgcaacagggcacatgcacaaccgt
gtacgaatgattgtggctagttttttatgcaaacatttattaatagactggcgttggggt
gaggcttattttgctacaaaattattagattatgagcaatcaagtaatgtaggcaactgg
caatgggctgctgggagtggggtagatgcagcaccttactttaggatttttaacccaacc
gagcagattaaaaagtttgaccccaatttacaatacatcaaaaaatggattccagagtta
gaaacccctcagtatcctaaacctatggtagatcataaaatagctcgtgaaagatgctta
actacctataaaacgatagtaggttaa
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