Flavobacterium columnare: FCOL_07495
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Entry
FCOL_07495 CDS
T01653
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fco03016
]
FCOL_07495 (truA)
Enzymes [BR:
fco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FCOL_07495 (truA)
Transfer RNA biogenesis [BR:
fco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FCOL_07495 (truA)
Prokaryotic type
FCOL_07495 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
PMI_typeI_hel
CFAP54_N
Motif
Other DBs
NCBI-ProteinID:
AEW86318
UniProt:
G8X6V7
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All DBs
Position
1735100..1735846
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AA seq
248 aa
AA seq
DB search
MRYFIEFAYKGTHYHGWQYQPNAISVQETLNKVFSTLLQESIEIVGAGRTDTGVHASQMY
GHFDTQKELDLAKLKQRANSFLPKDIALFRIIPVHDEAHARFDATSRTYHYYISTQKNAF
NTELAWYNHHILDINTMNEACKILFEYIDFECFSKTHTDVHTFNCKITEAYWRKENQNLV
FTITADRFLRNMVRAIVGTMVNIGTHKITKEDLVSIIESKDRKKAGFSVPAQGLFLSKVT
YPYINESI
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
ttgagatattttattgaatttgcatataaaggcacccattatcatggttggcaataccaa
cccaatgccatttcagtacaagaaactttaaataaagtattttctacacttttacaagaa
agtatagaaattgtaggtgctggtagaactgatacaggagtacatgcttcacaaatgtat
gggcattttgatactcaaaaagaactagatctagcaaaactaaaacaaagagctaattcc
tttttaccaaaagatattgctctatttcgtattattccagtacatgatgaagcgcatgct
cgttttgacgctacttctagaacctaccattattacatcagtactcaaaaaaatgccttc
aatacagaacttgcttggtataatcatcatattttagatataaacacgatgaatgaagcc
tgtaaaattctttttgaatacatagacttcgagtgcttttcaaaaacacatacagacgta
cacacttttaactgcaaaataacagaagcctactggcgtaaagaaaaccaaaatttagtt
ttcaccatcactgccgatcgtttcttacggaatatggtaagagctattgtgggaactatg
gtaaacattggtacccataaaatcacaaaagaagatctagtatctattattgaaagtaaa
gaccgaaaaaaagcaggtttttcggttcctgcacaaggattatttttaagcaaagtaacc
tacccttacataaatgaaagcatttga
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