Flavobacterium columnare: FCOL_07690
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Entry
FCOL_07690 CDS
T01653
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fco
Flavobacterium columnare
Pathway
fco03030
DNA replication
fco03430
Mismatch repair
fco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCOL_07690
03430 Mismatch repair
FCOL_07690
03440 Homologous recombination
FCOL_07690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fco03032
]
FCOL_07690
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_07690
Enzymes [BR:
fco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCOL_07690
DNA replication proteins [BR:
fco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FCOL_07690
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FCOL_07690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
RNase_H_2
DEDDh_C
GIY_YIG_2
DNA_pol_A_exo1
GGDEF_GdpP
T5orf172
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AEW86357
UniProt:
G8X6Z6
LinkDB
All DBs
Position
1777418..1778779
Genome browser
AA seq
453 aa
AA seq
DB search
MYAILDIETTGGQYNEEGITEIAIYKFDGHEILDQFISLVNPEIPIQPFVVKLTGINNAM
LRSAPKFYEIAKRIIEITENCIIVAHNASFDYRVIKTEFKRLGYDYKKQTLCTVELSKKL
IPDQTSYSLGKLVRSLGIPVTDRHRANGDAMATVKLFKLLLSKDIEKTIVKSFIKTEIKS
GVTPKLLDILDHVPSKTGIYYIHNEQGEIIYIGKSKNIKKRINQHFTGLSKKSKKIQKEV
FTVTFEETGSELIALLKESEEIKINKPIYNKSLRKTLFPWALYTEKDIHGYLILKVLKAD
GRKKEIISFSSQEEGKNALFQITEKYQLYQKINGLYDSKNSCFQYEIKQCLGACINQEKP
KDYNTRVLEFIRNHQFQNQTMVIVDKGRTLEERSAVLIENGEYKGYCFYNLNHQIHTIEI
LKKIIIPMENNRDSRNIIQNFINKRKVLKIIKF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcaatactcgacatagaaaccacaggcggtcaatacaacgaagaaggtattacc
gaaatagccatctataaatttgatggtcatgagatcctagaccaatttatcagtttggtt
aatcctgaaattcccattcaaccatttgtagtaaaactaacaggtattaataatgccatg
cttcgtagtgctcctaaattttatgaaatagccaaacgaattatagaaattacagaaaat
tgtataattgtagctcacaatgcttcttttgactatagagtcatcaaaaccgaatttaag
cgtttgggatatgattataaaaaacaaacactttgtaccgttgaattatctaaaaaatta
attcccgatcagacctcttatagtttaggaaaactagtacgaagtttaggaattcctgta
accgatagacatcgtgcaaatggtgatgccatggcaaccgttaaactttttaagttactt
ctttcaaaagatatagaaaaaacgattgttaaaagttttataaaaacagagataaaatcg
ggtgtaacccctaaattgttagacattttagaccatgtacccagtaaaacaggtatttac
tacattcataatgaacaaggtgaaatcatttatattggaaaaagtaaaaatataaaaaaa
cgaatcaatcagcattttactggactttctaaaaaaagtaaaaaaatacaaaaagaagtc
tttacagttacttttgaagaaacaggtagtgagttgattgctctcttaaaagaaagcgaa
gaaataaaaataaacaaacctatttataacaagtctctacgtaaaaccctttttccatgg
gcactttatacagaaaaagacattcatggttatttgatcctaaaagttctaaaagccgat
ggtcgaaaaaaagaaatcatctcttttagtagccaagaagaagggaaaaatgccttgttc
caaattacagaaaaataccaattgtatcaaaaaatcaatggtttatacgattctaaaaac
agttgttttcaatacgaaattaaacaatgtttgggagcttgtatcaatcaagaaaaacca
aaagattacaatacaagagtattagaatttatacgtaatcaccaattccaaaaccaaacc
atggttattgtagacaaaggtagaacgttggaagaaagaagtgcggttcttattgaaaat
ggggagtataaaggctattgtttttataatttaaatcatcaaatacatactatagaaatt
ctaaaaaaaattattatccccatggaaaacaatagggatagtcgaaacattattcagaat
ttcatcaataaaagaaaagttttaaaaataataaaattttga
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