KEGG   Flavobacterium columnare: FCOL_08615
Entry
FCOL_08615        CDS       T01653                                 
Name
(GenBank) CRISPR-associated protein, Csn1 family
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
fco  Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:fco00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fco02048]
    FCOL_08615
Prokaryotic defense system [BR:fco02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    FCOL_08615
SSDB
Motif
Pfam: RuvC_III HNH_4 Cas9-BH Cas9_a Img2 MGDG_synth
Other DBs
NCBI-ProteinID: AEW86536
UniProt: G8X9H3
LinkDB
Position
complement(1995071..1999450)
AA seq 1459 aa
MKFNLGLDIGTNSIGWALVNEDYENKKGKIIAAGSRIIPMTQDILDKFGSGAITETQTAL
RTDYRSKRKLIQRFLLRRERLHRVLNVLDFLPKHYAESIDFEKYFGKFLPNTEPKLAYNQ
NQFIFQNSFLEMLKEFQEKHPELLTNNKKIPYDWTIYYLRKKALNQRIEKEELAWLLLQF
NQKRGYNQLRDEEEESVPNKQVEFYSLKIIDVVADQPKEGRDKRWYSINLENGWTYRRES
KTPLFNWEGKTKDFIVTTDLNQDGSIKKDKEGKEKRSFRAPSEGDWTLLKKKTEKEIYES
GKTLGTYIYDALLNTPDLKIKGDFIRTIDRSIYKEELQQIINKQKEYHLELNSSKLYKAC
LEELYPKNEIYKSALKNKDIAYLFINDILYYQRPLKAPKYNIGKCTYESRTFKKEDKKIR
EYIPAVAKSHPLFQEFRLWQWIKNLKIYEKLSSDNCTDFFLTNEQDFENLFEFLWNKKEI
DHKGILEYLVKTKFPDLKPKQVKTKVKEYRWNYVYDHEKDESKTYPCGETYFLLKNKLDK
IYNAQDDFLDKERLYNLWHIIYSVTDKKQYEKALAKFALKNHLDTKSFVNTFKRIPPFKN
DYAIYSLKAIKKLLPLMRVGKYWNYDDIDPITKQKIQCIITGEENDTISTLVREKTNHFS
NENDFKNLPLWLAGYIVYNSHNESSEIEKWKSPQDIDTFLKKFKQHALRNPIVEQVVTET
LRVVRDIWSKKGQGKKDFFNEIHIELGKDLKNPVDKRRKLSSTNTKNESTNTRIKALLIE
LFTQGVENVKPNSPKHQEILKIFEEGALNSGIEIEEDIIKISNTDQPTKKQLELYILWLE
HKYKSPYTGQSIPLSKLFTPNYEIEHIIPRSKYYDDNLSNKVICETEINRLKNNQLGYEF
INNHEIREVTLEEGKTIRLLSPEQYWNFVTTYYAKNKAKRENLLLKELPVQMVEKQLNDT
RYVSKYVMQLLSKIVRKEDGTDNGINSTNILSISGKMTRALKNDWDLNDVWNDLLLYRFE
RLNTITKTNLFTTYSEQKQKRMPIVPDQYAKGFHKKRLDHRHHALDAIVIACITRNHINY
MNNQNIQGEKLKKNAIEKENYREILQKSRLDIRAQLCEKKYNDNDPTKYNWVFIKPWADF
TENTKDILESIIPSFKQNLRIINKTVNYYEKYNENGKKVKVRQIKGDNWAIRKPLHKETI
SGKVHLSYKTPAKGKILTATRKVLDSSMDFKSIEKITDTGIQKILKNYLEYKKSPELAFS
PEGIEELNATITKYNNGFHHKPIYKVRIYEEGVKFPLGNKGNKKSKYVEAEKGTNLFFAI
YKDQENNRYFETIPFNDVLETLKKGMSAVPEKNQEENTLVFALSPQDLVFVPTLDEIENP
DIVDFKNLTKDQTNRIYKMVSSSGKQCFFIKAEVATSIVNKMEFSTSNKMENSIEGIQIK
SNCWKLKLDRLGTITRVIK
NT seq 4380 nt   +upstreamnt  +downstreamnt
atgaaatttaacttaggattagatatagggaccaattctattggttgggctctagtaaat
gaagactatgaaaacaaaaaaggtaaaattatagcggctggtagtaggatcatacctatg
acacaagatattttagataaatttggttcaggagcaattactgaaacgcaaaccgcttta
cgcacagattatcgtagtaaacgcaaattaatacaaagattcttattaagaagagagcgt
ttacatagggttttaaacgtactagattttttacctaaacattatgctgaaagcattgat
tttgaaaagtattttggaaaatttctgcctaatacagaacctaagttagcatacaatcaa
aatcaatttatttttcaaaattcttttcttgaaatgctaaaagaatttcaagaaaaacac
cctgaactacttactaataataaaaaaatcccttatgattggactatttattatttacga
aaaaaagcattaaatcaaagaatagaaaaggaagaattagcttggttattacttcagttt
aaccaaaaaagaggatacaatcaattaagagatgaggaagaggagagtgtaccgaacaaa
caagtagaattttattctctaaaaattatagatgttgtagcggatcaacccaaagaagga
agggataaaagatggtatagtattaatctagaaaatggatggacgtataggagagaaagt
aaaacgcccttatttaattgggaagggaaaacaaaagattttattgttactactgatctg
aatcaagatgggtctattaaaaaagataaagaaggaaaagaaaaaagaagttttagagcc
cctagtgaaggagattggacgctacttaaaaaaaagacagaaaaagaaatttacgaatca
ggaaagactcttggaacgtatatttatgatgccttacttaatacccctgatcttaaaata
aaaggtgattttatacgaaccatagatagaagtatttacaaagaagagcttcaacaaatc
attaacaaacaaaaagaatatcacctagaactgaatagttctaaactctataaagcttgt
ttagaagaattatatcctaagaacgagatatataaaagcgcattaaaaaataaggatatt
gcgtacttatttattaatgatattttgtattatcaacgtccattaaaagccccaaaatat
aatattggaaaatgtacttatgaaagtcgtacattcaaaaaagaagataaaaaaatcaga
gagtatatcccagcagttgctaaatcacatcctttatttcaagagtttcgtttatggcaa
tggataaaaaacctaaaaatatatgaaaaattatccagtgataattgcacggattttttt
cttactaatgaacaagattttgaaaatcttttcgaatttttatggaataaaaaagaaatt
gaccataaagggatattagaatatttagtaaaaacaaaatttcccgatctaaaacccaag
caagttaaaactaaggttaaagaatatcgttggaattatgtatatgatcatgaaaaagat
gaatctaaaacctatccttgtggtgaaacctattttttattaaaaaataaattagataaa
atttacaatgctcaagacgattttttagataaagaaagactttataatctttggcatatt
atttattccgtaacagataaaaagcagtatgaaaaagccttagcaaaatttgctcttaag
aatcaccttgatacaaaatcttttgtaaatacctttaaaagaattcctccttttaaaaat
gattatgctatttactctttaaaagcaataaagaaattattaccattaatgcgagtagga
aaatattggaattatgatgatattgacccaattaccaaacaaaaaatccaatgtattatt
acaggtgaagaaaatgatactatttctactctagttagagaaaaaacaaatcatttttct
aacgaaaatgattttaaaaacctacctctttggttggcagggtatatagtatacaatagc
cataacgaaagttctgaaattgaaaaatggaaatcgcctcaagatatagatactttctta
aaaaagtttaaacaacatgctctaagaaaccctattgtagaacaagtagtaaccgaaacc
cttcgagtagtaagagatatatggtcaaaaaaaggccaaggtaaaaaagattttttcaac
gaaatacatatagagttagggaaagatttaaaaaaccctgttgataaacgcagaaaatta
tccagtactaatactaaaaatgaatctacaaatacaagaataaaagcactccttatagag
ctatttacacaaggtgttgaaaacgtaaaacccaattcgcccaaacaccaagaaatttta
aaaatatttgaagaaggggctttaaattcaggaattgaaatagaagaggatattataaaa
atcagcaatacagatcaacctacaaaaaagcagttagaactttatatactctggttagaa
cataaatataaatcgccttacacaggccaatccattccgttaagcaaattgtttactcct
aattatgaaatagaacatatcatacctagaagtaaatattatgatgacaacctatcaaat
aaagtgatatgcgaaacagaaataaatagattaaaaaataatcaattaggatacgaattt
attaacaaccacgaaatacgagaggttactttagaagaaggcaaaacaataaggttatta
agcccagaacaatattggaattttgttactacatattatgcaaaaaacaaagctaaaaga
gaaaaccttttgttaaaagaacttccagtacaaatggttgaaaagcagttaaacgatacc
cgttacgtaagtaaatatgtgatgcaattattgtctaaaatagttagaaaagaagacgga
acagataatggcataaattcaacaaatatcttatctatttcaggaaaaatgacccgagca
cttaaaaacgattgggatcttaatgatgtctggaatgatttattactctatcgcttcgag
cggttaaacacaattacaaaaacaaatttgtttactacctatagtgaacaaaaacaaaaa
aggatgcctatagtgcctgatcagtatgctaaaggatttcataaaaaaagactagatcat
cgccatcatgccttagatgccattgtaatagcctgtattactcgtaaccatattaattat
atgaataaccaaaatatacaaggtgaaaaattaaagaagaacgcaattgagaaagaaaat
tatcgtgaaatacttcaaaaatcacgattggatatcagagcacaattatgcgaaaaaaaa
tacaatgataatgatccaacaaaatacaattgggtttttataaagccttgggctgatttt
actgaaaacacaaaagatattttagaatctattattccgtcttttaaacaaaatttaaga
atcataaacaaaaccgtaaactactacgaaaagtataatgaaaatggaaaaaaagtaaaa
gtaagacaaattaaaggagataattgggccattcgtaaaccattacataaagaaaccatt
tctggaaaagtacatttgtcatataaaacaccagccaaaggaaaaatcttaacagcaacg
cgcaaggtattggatagcagtatggattttaaatctattgaaaaaattacggacacagga
attcaaaaaatactcaaaaattatttagaatataaaaaaagtcctgaattggctttttcc
ccagaagggatagaagaactaaacgcaacgataacaaaatataacaatggttttcatcat
aaacctatttataaagtacgtatttatgaagaaggagtaaagtttcctttagggaataaa
ggcaacaaaaagagcaaatatgtagaagccgaaaaaggaacaaatttgttttttgccatt
tataaagaccaagaaaataatcgttattttgaaacaatcccttttaatgatgttttagaa
acattaaagaaaggaatgtccgcagtgccagaaaaaaatcaagaagaaaatactttagtc
tttgcattatcaccacaagatctagtattcgtacctacattagatgaaatagaaaatcca
gatattgtagattttaagaatttgacaaaagaccaaaccaatagaatttataaaatggtc
agttcctctggaaaacaatgtttttttattaaggctgaggttgccacttctattgtaaac
aaaatggaatttagtacttctaataaaatggaaaactccattgaaggtattcaaattaaa
tcaaactgttggaaattaaaattagatagattaggtactattacaagagtaatcaaataa

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