Flavobacterium columnare: FCOL_08695
Help
Entry
FCOL_08695 CDS
T01653
Name
(GenBank) putative RNA binding protein with S1 RNA-binding domain
KO
K06959
protein Tex
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
FCOL_08695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_YqgF
HHH_3
Tex_central_region
HHH_9
Tex_N
S1
HHH_7
YqgF
T2SSK
HHH
HHH_6
HHH_5
Spt6_S1
S1_RRP5
HHH_2
PD-C2-AF1
Motif
Other DBs
NCBI-ProteinID:
AEW86552
UniProt:
G8X9I9
LinkDB
All DBs
Position
complement(2016451..2018574)
Genome browser
AA seq
707 aa
AA seq
DB search
MTNIDFILKGVQTTPKNIQNTLELLSQDCTIPFIARYRKDTTGNLDEVVIEQIAKLNKQY
DEIIKRKESVLKSIEEQNALIPELKSKIENSFDLQEIEDLYLPYKKKKKTKADTARENGL
EPLAKIIMSQRNDDIEFLASKYINDKVTNEEEALQGARDIIAEWVNENIFIRKNLRRMFQ
RKAEITTKVVKAKKDDQEAQKYNQYFEWAEPISKAPSHRLLAMLRAEAEGFVKLNVEIEK
EEAVSFIEDNIIKSKNDTTLHIQLAIKDSYKRLLEPAISNETLQEAKEKADIKAIDVFAS
NLSQLLLAPPLGEKRILAIDPGFRTGCKVVCLDEKGDLLYNETIFPHAPQNETTMAMKKI
KSMVNAYNIEAISIGNGTASRETEFFIKKIAFDKPVQVFVVSEAGASVYSASKIARDEFP
NYDVTVRGAVSIGRRLSDPLAELVKIDPKSIGVGQYQHDVDQTKLNSALDTTVVRCVNSV
GININTASKSLLSYVSGIGEKMAENIVAYRSENGAFEDRSQLKKVPRLGDKAFQQAAAFI
RIKDGKNPLDNSAVHPESYKMVEKMAKDLGVKVNELIGNKEKISQIKPENYITENVGILG
IKDILKELEKPGLDPRKAAKVFEFDPNVKTIADVRSGMILPGIVNNITAFGCFVDIGIKE
SGLVHISQLKEGYVADVNEVVKLHQHVQVKVVEVDEARKRIQLTMIL
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatattgactttatcctaaaaggagtccaaacgactcccaaaaatatccaaaat
acacttgaattactttcgcaagattgtacaattcctttcatagcacgttatcgaaaggat
accacaggaaatttagatgaggtagttatagaacaaatagccaaactaaacaaacaatat
gatgaaattataaaacgtaaagaaagtgttttaaaatcaatagaagaacaaaatgctctt
ataccagaactaaaatcaaaaattgaaaacagttttgatttacaagaaatagaagattta
taccttccttacaaaaagaaaaagaaaactaaggcagataccgcccgtgaaaacggatta
gaacctttggcaaaaataattatgtcgcagcgtaacgatgatattgaatttttagcatct
aaatatattaatgataaggtaactaacgaagaggaagccttacaaggagctcgtgatatt
atagcagaatgggttaatgagaatatttttattcgtaaaaatttacgtagaatgtttcag
cgaaaagctgaaattacaactaaagtagtgaaagctaaaaaagacgatcaagaagctcaa
aagtataatcaatatttcgaatgggctgaacccattagtaaagcaccttcgcaccgattg
ttagccatgctaagagcggaagcagaaggttttgttaaattgaatgtagaaattgaaaaa
gaagaagctgttagttttattgaagataacattattaaatcaaaaaatgatacaacatta
catattcaattagctattaaagattcttataaacgattgttagaacctgctatttctaat
gaaacgttacaagaagccaaagaaaaagctgatattaaagcaattgatgtttttgcgagt
aatttaagtcagttattattggctccacctttaggtgaaaaacgaattttagctattgac
cccggatttagaacgggatgtaaagtggtttgtctggatgaaaaaggtgatttgctatac
aatgaaaccatttttccgcacgcaccgcaaaatgaaacgactatggcaatgaaaaaaata
aaatcgatggtgaatgcttataatattgaagccatttctataggcaacggaacagcgagt
cgtgaaaccgaatttttcatcaagaaaattgcttttgataaaccagtccaggtttttgta
gtttcagaagctggagcgtcagtctattcggcatctaaaattgcgagagatgaatttcct
aattatgatgtgacggttcgtggtgccgtttctattgggcgccgtttatctgatccctta
gccgaattggttaaaattgacccaaaatctattggtgtagggcagtaccaacacgatgtg
gaccaaaccaagttaaattcagcattggataccacggtagtacgttgcgtaaactcggtt
gggattaatattaacacggcgagtaaatcattgttgagctatgtttcaggaattggcgaa
aaaatggctgaaaacattgtggcgtatcgtagtgaaaatggggcttttgaagaccgtagc
caactgaaaaaagtgccgcgattaggagataaagcgttccaacaggcagcggcatttatt
agaatcaaagacggtaaaaacccgttggataattcggccgtgcatcctgaatcgtataaa
atggtcgagaaaatggctaaagatttgggtgttaaagtcaatgaattaatcgggaataag
gaaaaaatcagtcaaatcaaaccagagaattatattactgaaaacgtgggtattttaggt
atcaaagatattttaaaagaattggaaaaaccaggactagacccacgtaaagcggccaaa
gtttttgaattcgacccgaatgtaaaaaccattgctgatgttcgtagcggaatgattttg
ccaggtattgtaaataatatcaccgcatttggttgttttgttgacattggaatcaaagaa
agcggactcgtacatatttcccaactcaaagaaggctatgttgccgatgtgaatgaagtg
gtaaaactccaccaacacgtgcaagtaaaagtcgttgaggtagatgaagccagaaaaaga
attcagttgacgatgatattgtaa
DBGET
integrated database retrieval system
