Flavobacterium columnare: FCOL_08925
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Entry
FCOL_08925 CDS
T01653
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fco03016
]
FCOL_08925
Enzymes [BR:
fco01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FCOL_08925
Transfer RNA biogenesis [BR:
fco03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FCOL_08925
Prokaryotic type
FCOL_08925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Tab2-like_N
Motif
Other DBs
NCBI-ProteinID:
AEW86594
UniProt:
G8X9N1
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All DBs
Position
2090796..2091494
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AA seq
232 aa
AA seq
DB search
MYTKEDILNGQILLIDKPLNWSSFQAVNKLKYVLKNRLDLPKKFKIGHSGTLDPLATGLL
IVCTGKYTKKIPELMGQTKEYTGTIQLGATTPSYDLETPVNATFPINHITPVLITETVKQ
FIGEIEQKPPVFSALKKEGKRLYEYARTGTEIEIEARKTTIYEFEITRIELPEIDFRVSC
SKGTYIRSLAHDLGAALESGGHLTALRRTKSGDFSVEKALTPDAFSELITNN
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
ttgtacacaaaagaagacatattaaacggacagatcttattgatagacaaacctctcaat
tggagctcttttcaagcggttaataaattaaaatatgtattaaaaaaccgattagattta
cctaaaaaatttaaaataggtcattcaggtaccttagaccccttagcaacggggttactg
attgtttgcacaggaaaatacaccaaaaaaattcctgaattaatgggacaaacgaaggaa
tatacaggtactatacaattaggtgctacaactccttcttatgatttagaaacacctgta
aacgctacttttcctatcaatcatattacgcctgtactcataacagaaaccgttaaacaa
tttataggtgaaatagaacaaaaaccacctgtcttttctgccttaaaaaaagagggtaaa
cgcttatatgagtacgcacggactggaaccgaaatagaaatagaagcacgaaaaacaact
atttacgaatttgagataacccgaattgagttacctgaaattgattttagggtcagttgt
agtaaaggtacttatattcgctctctagctcatgatctaggagctgccttagaatctggt
gggcatttaacggctttaagacgtacaaaaagtggtgatttttctgtagaaaaagcatta
acacctgatgcgttttcagaattaattactaataattaa
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