Flavobacterium columnare: FCOL_09510
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Entry
FCOL_09510 CDS
T01653
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
fco
Flavobacterium columnare
Pathway
fco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCOL_09510
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fco01007
]
FCOL_09510
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fco03016
]
FCOL_09510
Enzymes [BR:
fco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
FCOL_09510
Amino acid related enzymes [BR:
fco01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
FCOL_09510
Transfer RNA biogenesis [BR:
fco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
FCOL_09510
Prokaryotic type
FCOL_09510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Med11
FapA
Baculo_PEP_C
Allexi_40kDa
Motif
Other DBs
NCBI-ProteinID:
AEW86711
UniProt:
G8XBD1
LinkDB
All DBs
Position
2226780..2228051
Genome browser
AA seq
423 aa
AA seq
DB search
MLQIAVIRENQEAVIKSLAKKNIDARSLIEKVVALDEKRRATQVELDNVLAESNKLSKEI
GAMMKAGEKAKAEIIKEKTTQLRDQSKELTETLNSIAEELTQQLYQLPNTPTEIVPEGKT
ADDNLNVFQEGEIPTLHEGALPHWELAKKYDIIDFELGTKITGAGFPVYKGKGAKLQRAL
INYFIDKNTEAGYNEVQVPHLINEASGYGTGQLPDKEGQMYHVGIDDLYLIPTAEVPVTN
LYRDVILQETEMPVMVTGYTPCFRREAGSYGAHVRGLNRLHQFDKVEIVRIEHPDNSYQA
LDGMVEHVKGILNELKLPYRILRLCGGDMSFASALTYDFEVFSTAQERWLEISSVSNFET
FQSNRLKLRFKGKDGKTQLAHTLNGSSLALPRVLAGILENYQTPEGIIIPEVLRKYTGFD
IID
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgttacagatagcagttattagagaaaaccaagaagcggtaatcaaatctttggcaaag
aaaaacatagatgccagatccctgatagaaaaggtggtagctcttgacgaaaaacgtcgt
gctactcaagtggagttagataatgtattggcggaatctaataaactatccaaagaaatt
ggggctatgatgaaagcaggcgaaaaagccaaagcagaaatcattaaagaaaaaacaacc
caattacgtgatcagagtaaagaattaaccgaaacgctaaacagtattgctgaggagtta
acacagcaattatatcaactacccaatacacctacagaaattgttccagaaggtaaaaca
gctgatgataatctaaatgtttttcaagaaggagaaattcctactttgcatgaaggagcg
cttcctcattgggaattagctaagaaatatgatattattgattttgaattagggactaag
attacaggtgctggttttcccgtttacaaaggaaaaggagccaaattacaacgtgcttta
atcaactactttatcgataaaaatacagaagcgggatataatgaagtacaagtgcctcat
ttaattaatgaagcatcgggttatggaacagggcagttacctgataaagaaggacaaatg
taccatgtaggaattgacgatttatatttaattccaacggcagaagttccagtaaccaat
ttataccgtgatgttatcttacaagaaacagaaatgcccgtaatggtaacaggttatact
ccttgtttccgccgagaagcaggttcgtatggagcacatgtacgagggttaaaccgttta
caccaatttgataaagtagagattgttcgtattgaacacccagataattcttatcaagct
ttagacggaatggtagaacacgtaaagggaattttaaatgagttgaaattaccgtaccgt
attttgcgcttatgtggaggtgatatgagttttgcttcagcattaacctatgattttgaa
gtattttcaacagcacaagaacgttggttagaaatatcttctgtatctaattttgaaacc
ttccaatcaaaccgtttgaaattacgttttaaaggaaaagatggaaaaacccaattagcc
catactctaaatggtagctcattagccttgcctcgtgtattagcaggaattttagaaaat
tatcaaacaccagaaggaattataattccagaagtattaagaaaatatacaggttttgat
attatagactaa
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