Flavobacterium columnare: FCOL_09615
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Entry
FCOL_09615 CDS
T01653
Name
(GenBank) polyprenyl synthetase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
fco
Flavobacterium columnare
Pathway
fco00900
Terpenoid backbone biosynthesis
fco01100
Metabolic pathways
fco01110
Biosynthesis of secondary metabolites
Module
fco_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
FCOL_09615
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fco01006
]
FCOL_09615
Enzymes [BR:
fco01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
FCOL_09615
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
FCOL_09615
2.5.1.29 geranylgeranyl diphosphate synthase
FCOL_09615
Prenyltransferases [BR:
fco01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
FCOL_09615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AEW86732
UniProt:
G8XBF2
LinkDB
All DBs
Position
complement(2254935..2255909)
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AA seq
324 aa
AA seq
DB search
MQAISTYQDIITKHFEDLSIKKEPLNLYDPIQYILCLGGKRIRPVLTLMAAEIFDISYTK
ALSAATAIEVFHNFSLVHDDIMDNAPLRRGNETVHEKWNINTGILSGDAMLILAYQYFEN
YEPAIFKELAQLFSKTALEVCEGQQYDVDFETRKSVSVSEYLKMIEYKTAVLVGAALKMG
AIIAETSTENANLIYEFGLNLGIAFQLQDDYLDAFGNPLTFGKQIGGDIIENKKTYLYIK
ALEFASEKETTQLQQLYSSHPKDNSPKIETVKNIFNSTGASTATQEAIKEYTLKAFSTLE
KIKISEDKKVILKAFGENLMNRNV
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcaattagtacctatcaagatatcattacaaaacatttcgaggatttatcaata
aaaaaagaacccctaaacttatacgaccctatacaatatatcttatgtttagggggaaaa
agaatacgtcctgtattaacattaatggccgctgaaatttttgacatttcttataccaaa
gccctttcagcagctacagcaatagaggtttttcataacttttcgttagtacatgatgat
attatggataatgctcctttaagaagaggcaacgaaactgttcatgaaaaatggaatatt
aacacaggtattctttctggcgacgctatgcttatcttagcctatcaatattttgaaaat
tatgaacctgctatttttaaagaattagcacaattattcagtaaaaccgcccttgaggtc
tgtgaaggacaacagtatgatgtagattttgaaaccagaaagtctgtaagcgtttcggaa
tatcttaaaatgattgaatacaaaaccgccgtactagtaggcgctgcattaaaaatggga
gctataatagcagaaacttctactgaaaatgcaaacctaatttatgaatttggtttaaat
ttaggaattgcttttcagcttcaagacgattatttagatgcttttgggaacccgttaacc
tttggaaaacaaataggaggcgatatcatagaaaacaaaaaaacatatctttatataaaa
gcattagagtttgcctctgaaaaagagacaactcaactacaacaattgtattcctctcac
cctaaggacaatagtcctaaaattgaaacagtaaaaaatatttttaattcaactggagcc
agtacagccacacaagaagccatcaaagaatatactcttaaagcttttagtacactagaa
aaaataaaaatcagtgaagataaaaaagttattctgaaagcttttggagagaacttaatg
aatagaaatgtataa
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