Flavobacterium columnare: FCOL_09925
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Entry
FCOL_09925 CDS
T01653
Name
(GenBank) type II secretion system protein E
KO
K02652
type IV pilus assembly protein PilB
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fco02044
]
FCOL_09925
02035 Bacterial motility proteins [BR:
fco02035
]
FCOL_09925
Secretion system [BR:
fco02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
FCOL_09925
Bacterial motility proteins [BR:
fco02035
]
Pilus system
Pilus assembly proteins
FCOL_09925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
T2SSE
nSTAND_NTPase5
AAA_14
AAA_16
nSTAND3
AAA_22
AAA_29
ResIII
AAA_19
MshEN
ABC_tran
Rad17
AAA_30
Zeta_toxin
AAA_11
AAA_23
cobW
ATPase_2
PhoH
NPHP3_N
AAA_5
AAA_7
DEAD
TsaE
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AEW86794
UniProt:
G8X4X8
LinkDB
All DBs
Position
2336351..2337757
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AA seq
468 aa
AA seq
DB search
MDNILDVNPENILAISSELANHYRIIPKQVDNDFLQLYIDTLYKNSNTQEELELLTGKNI
KLFEANTNIIEKALSIHYRKERIDTKKKNFDVEKQDFLESLLEEAKVLKSSDIHFEVYED
NARIRLRIDGQLIERYKIQKDNYLELVNKVKIKAKLNITEKRLPQDGRITNEAFDIRVSI
LPTLFGEKIVMRLLGQDASNIDLNALGFKNDELEKYLQAVKKPNGIILISGPTGSGKTTT
LYATLKLLNDSKRNIVTVEDPIEYTLKGINQVQLKEDIGLTFASALKFFLRQDPDVIMLG
EIRDSETALMAIRASLTGHLVLSTIHTNSAIGTMSRLIDMGVPAYLISETLNLSVAQRLV
RKLCENCKQEVSVDKEDFPMSFHFPYPLEKHFKTCGCNQCFHTGYKGRTAIYEVIHVDNK
LAAAIKHNNIVEIFENDKVHQTLAHKAFDLLAKGETSLDEIYPILIAQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggacaatatattagatgttaatccagaaaatattttggctatttctagtgagttagcc
aatcattatcgtattatcccaaaacaagtagataatgattttttacaattatatattgat
actttatacaaaaactcaaatactcaagaggaacttgaacttttaacaggtaaaaacatt
aaactatttgaagcaaacactaatataattgaaaaggcattgtctattcattatcgtaaa
gaacgtattgatactaaaaaaaagaattttgatgttgaaaaacaggattttctagaatcg
ttactagaagaagcaaaagtattaaaaagcagtgatattcattttgaagtttatgaagat
aatgctcgaattcgtttacgtattgatggtcagcttattgaacggtataaaattcaaaag
gataattatcttgagttggtgaataaagtaaaaataaaggctaaacttaatatcactgaa
aaaagattgccgcaagacgggcgtattaccaatgaagcttttgatataagggtgtccatt
ttgccaacactttttggcgaaaagatagtgatgcgtttattagggcaagatgcttcaaat
attgatttaaatgctttaggttttaaaaacgatgaattagaaaagtaccttcaagccgta
aagaagcccaatggtattattttaataagtggtcccactggttcaggaaaaacgactact
ctgtatgctactttaaaattattaaatgacagtaagcgtaatattgttaccgtagaagac
ccgatagaatacactctcaaaggaatcaatcaagtacaactcaaagaagatattgggctt
acttttgcttctgctttgaaattctttttacgacaagatccagatgtgattatgttggga
gaaattagggattcagaaacggcacttatggctattagggcttcactgacaggacaccta
gttttatcaactatccatacaaattctgctattggtaccatgtcgcgtttaattgatatg
ggcgttcctgcctacttaatctctgaaaccttaaatttatcagtagcacaacgattggtc
agaaaactttgtgaaaattgtaagcaagaagtaagtgttgataaagaggattttcccatg
agttttcattttccatatccgcttgaaaaacactttaaaacgtgtggatgtaatcaatgt
tttcacactggatacaaaggtagaacagctatctatgaagtaattcatgtagataacaaa
ttagcagcagctataaagcacaataatatagttgaaatttttgaaaacgacaaggttcac
caaaccttagctcataaagctttcgatctcttagcaaaaggagaaacctcattagatgaa
atttatccaattttaattgcacaataa
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