Flavobacterium columnare: FCOL_10085
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Entry
FCOL_10085 CDS
T01653
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fco
Flavobacterium columnare
Pathway
fco03030
DNA replication
fco03430
Mismatch repair
fco03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FCOL_10085
03430 Mismatch repair
FCOL_10085
03440 Homologous recombination
FCOL_10085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fco03032
]
FCOL_10085
03400 DNA repair and recombination proteins [BR:
fco03400
]
FCOL_10085
Enzymes [BR:
fco01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FCOL_10085
DNA replication proteins [BR:
fco03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FCOL_10085
DNA repair and recombination proteins [BR:
fco03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FCOL_10085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AEW86826
UniProt:
G8X510
LinkDB
All DBs
Position
2372023..2376555
Genome browser
AA seq
1510 aa
AA seq
DB search
MYLIFDTETTGLPRSWSAPITDTDNWPRCIQIAWQLHDEMGQLIEHQDYLVKPEGFNIPY
DAERVHGISTELAIEQGISLQEVLEKFNIALSKAKYIVGQNVGFDVNIMGCELYRGGVAS
TLSQMPVLDTCTETTAELLKLPGGRGGRYKLPTLTELHQFLFGEPFAEAHNATADVEATT
RCFFELLKREIFTQEELDVPEDYYMRFRQNNPQEIKLIGLKHINLKSASDEIRKRLKKIQ
QEGDETLVSEEAIKNLEQAVYAHLHNHTQFSVLQSTISIPAIVNAAAKSKMPAVAMTDVG
NMMGAFQFVSAVLNHNKVAKAKNEANIEKGEAASEVEIKPIVGGEFLVCNNHKDKSVKDN
GYQVVFLAKNKKGYHNLAKMASIAYTEGFYYVPRIDRKIVEQYKEDIIVLSGNLYGEIPS
KILNLGENQAEEALLWWKSQFGDDFYLEIMRHNQEDENRVNQTLIQFAQKHQVKLIATNN
TYYVAKEDANAHDILLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKTQEEMKRLFVDLPE
AIINIQEIIDKIEIYSLYRDVLLPKFDIPEEFLVADDNQDSGKRGENKYLRYLTYEGARK
RYPEIADESIDPTKTSEIKDRLDFELLTIEKTGYPGYFLIVQDFIAAARKMGVSVGPGRG
SAAGSAVAYCLGITNIDPIKYDLLFERFLNPDRVSMPDIDIDFDDEGRGDVMQYVIDKYG
ANQVAQIITYGKMATKSAIRDTARVLDLPLFEADKIAKLIPAMMPSKWNLARFLKEEEGD
VKKALKSSEEFDRIKELISIANEGDLAGETIQQAKVLEGSMRNTGIHACGVIITPDDITN
FVPVTTAKDSDLYVTQFDNSVAESAGLLKMDFLGLKTLTLIKDTVKLVKYRLGIDLDPDN
FPIDDVKTYELFQRGETVGVFQYESPGMQKYMKDLKPTVFADLIAMNALYRPGPLEYIPS
FVRRKNGDEEITYDLDACEEYLAETYGITVYQEQVMLLSQKLANFSKGDADVLRKAMGKK
QKDVLDKMKSKFIDQAMANGHDAQKLDKIWTDWEAFASYAFNKSHSTCYAWVAYQTAYLK
AHYPAEYMAAVLSNNMNDIKQVSFFMEECKRMGLEVLGPDVNESFYKFTVNENYAIRFGM
GAIKGVGEGAVNTIIENRKEGKYKSIFDLAKRIDLRAANKKAFENLALSGGFDCFENTHR
AQYFHHDGDNIWFLEKAMKYGAKMQENENSSQVSLFGDTTEVQIPEPTVPPCEEWHTMEK
LAREKEVVGIYISGHPLDDYKYEMKYFCNTRLEQLSYLEQLVGKNISLAGMVTNVQHRTA
KNGKGWATFNLEGYDETYEFRIFDEEYLKFRHYLVQNQFVYFKLNVKEGWTNRETGKKSD
PRIQFMDGKMLADVLPTYAKKMTILFSIYEIKEDLINNLYNLFVENKGEHQVTFEVMELE
KIKKQLQIESAPVEDNQTDDIENVEIEIPEEKEEIIVRNMLSMPSRKIKIKISSELLQEM
EDRQINFKIV
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaatttttgataccgaaactacaggtttaccgcgtagttggtctgcacctatt
actgatacagacaattggccgcgttgtatacaaatagcttggcagctgcatgatgaaatg
gggcaacttatagaacatcaagattatctggttaaaccggaaggatttaatattccttac
gatgcagaaagagttcatggtatttctacggaattagccatagaacaaggaattagtttg
caagaagtgttagaaaaatttaatatagcgctttcaaaagccaaatatatcgttggtcaa
aatgtaggatttgatgttaacatcatggggtgtgagttgtatagaggaggagtagcctct
actttgtcacaaatgcctgttctagatacttgtacagaaacgacagcagaattgcttaaa
ttacctggaggtcgtggaggtagatataaattgcctacacttactgaattacatcagttt
ctttttggcgaaccttttgcagaagcacataatgctaccgccgatgtagaagccactacg
cgttgtttttttgaacttctaaaaagagagatctttacgcaagaagagttagatgtgcct
gaggattattatatgcgttttcgccaaaataatcctcaagaaattaaattgattggttta
aaacacatcaatttaaaatctgcttcagatgaaattcgaaaaagattaaaaaaaatacag
caagaaggagatgaaacccttgtttcggaagaagcaattaaaaatctagaacaggctgta
tacgcacatttgcataatcatacccagttttcagtactacaatctacgatttctatccct
gctattgttaatgcagcagccaaaagtaaaatgcctgcagtggctatgacagatgttggc
aatatgatgggggcatttcagtttgtaagtgctgttctaaaccataataaggtagctaaa
gcaaaaaatgaagcgaatatagaaaaaggggaagcagcttccgaagttgaaataaaaccg
attgttggaggcgaattcttggtgtgtaacaatcataaagataagtccgtaaaagacaat
ggataccaggtggtttttttagcaaaaaacaaaaaagggtatcataatttggcaaaaatg
gcttctattgcttacacagaagggttttattatgtaccgcgtatcgatcgaaagatagtt
gaacaatataaagaagatataatagtattatcaggtaatttgtatggagaaattcctagc
aaaatactgaatctaggtgaaaaccaagcagaagaagcacttttatggtggaaatcacag
tttggagatgatttttatctcgaaataatgcgtcataatcaagaagatgaaaatcgtgtc
aatcaaaccttaatacagtttgcgcagaaacatcaagttaaattaatagcaactaataat
acctattatgtggccaaagaagatgctaatgcccatgatatcttattatgtgtaaaagat
ggagaaaagcaggctacacctataggaagagggcgtggttataggtatggacttcctaat
caagaatattattttaaaacacaagaagaaatgaaacgtctttttgtggatttgcctgaa
gcaattatcaatatacaagaaattattgacaagatagagatctattctttataccgtgat
gtattattacctaagtttgatattccagaagaatttctagtagcagacgacaaccaagat
agcggtaaaagaggagaaaataaatatttgcgctatcttacctatgaaggagctcgaaaa
agataccccgaaattgctgacgaatcaatagatccaaccaaaacgtccgaaattaaagat
cgtttggactttgagttgttaacaattgaaaaaacggggtatcctggttatttcttgata
gtccaagattttattgcagccgctagaaaaatgggcgtttcagtggggcctggccgtggc
tccgcagcaggttcagcggttgcttattgcttaggaattaccaatatagatcctattaag
tatgacttactttttgagcgttttttgaatcctgatcgtgtgtctatgcccgatatagat
attgactttgatgatgaaggacgaggagatgtaatgcaatacgtaattgataaatatgga
gctaaccaagtagcacaaatcattacgtatggtaaaatggccaccaaatcagctatacga
gatactgcaagggtgttggatttgcctctgtttgaagctgataaaattgcaaagctcatt
ccagctatgatgccttccaaatggaatttggcgcgatttttaaaagaagaagaaggagat
gttaaaaaagcactcaagtcttctgaagaatttgatcgaatcaaagagttgattagtata
gcaaatgaaggcgatttggcgggagaaaccattcagcaagctaaggtacttgaaggttcc
atgcgtaatacaggtatacatgcctgtggtgttatcattacaccagatgatataacgaat
ttcgttcctgtaactactgctaaagactctgatttatatgtcactcagtttgataactca
gtagcagaaagtgcaggcttgctaaaaatggactttttgggtctcaagaccctaacttta
ataaaagacaccgttaaattagttaaatatcgtttaggaatagacttagatcctgataat
ttccctatagatgatgttaaaacgtatgaactttttcaacgaggagaaactgtgggggtc
tttcagtacgaatctcctggtatgcaaaaatacatgaaggatctaaaaccaactgttttt
gcagacttaattgccatgaatgccttgtatcgtccaggaccattagaatatattccttcc
tttgtgcgacgaaaaaatggagacgaagaaataacctacgatttagatgcttgtgaagaa
tatttagcagaaacctatgggattactgtataccaagaacaggtaatgctcctttcacaa
aagttagcaaatttctctaaaggtgatgccgacgttcttcgtaaagcaatgggtaaaaag
caaaaagacgttctagataaaatgaaatctaagttcatagatcaagccatggctaatggt
catgatgctcagaaattagataaaatatggactgactgggaagcctttgcaagttacgca
tttaataaatcacactctacttgctatgcttgggttgcttatcagacggcttatctaaaa
gcgcattatccagcggagtatatggctgcggttctttccaataatatgaatgatattaaa
caagtatctttctttatggaagaatgtaaacggatggggttggaagttttagggcctgat
gtaaatgaatctttttataaatttacagtaaatgaaaattatgccattcgttttggtatg
ggggcaattaaaggggttggtgaaggtgctgtaaataccattatagaaaatagaaaagaa
ggtaaatataaatccatttttgatttagctaagcgaatagatttaagggccgcaaacaaa
aaagcatttgaaaacttagccctctcaggaggatttgattgctttgaaaatacacataga
gctcagtattttcatcacgatggtgataatatctggtttctggaaaaggctatgaaatat
ggagccaaaatgcaagaaaatgaaaattcctctcaagtaagcttgtttggagatactact
gaagttcaaataccagagcccacagttcccccatgtgaagaatggcataccatggaaaaa
ttagcacgagaaaaggaagtggtaggaatttatatttcaggccatccactagatgattat
aaatatgaaatgaaatatttctgtaatactcgtttagaacaattgtcttacttagaacaa
ttggttggcaaaaatatttctttagcaggtatggttacgaatgttcagcatagaaccgct
aaaaatggtaaaggatgggcaacatttaatctagaaggatatgatgaaacgtatgaattt
agaatttttgatgaagaatacctaaaattccgtcattatttagttcaaaaccaatttgtt
tattttaagttaaacgttaaagaaggttggacaaatcgtgaaacaggtaaaaaatcagat
cctagaattcaatttatggatggaaaaatgctcgctgatgttcttcccacgtatgcaaag
aaaatgactattcttttttctatatatgaaataaaggaagatctaataaataacctgtat
aacttatttgttgaaaataaaggagagcatcaggtaacttttgaagtaatggagctggaa
aaaattaaaaaacaattgcaaattgaaagtgcccctgttgaagataaccaaacggatgat
atagaaaatgtagaaatagaaataccagaagaaaaagaagaaattattgtcagaaatatg
ctatccatgccaagtcgtaaaataaaaataaaaatatcttccgaactgttgcaagaaatg
gaagataggcaaataaattttaaaattgtttag
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