Flavobacterium columnare: FCOL_10185
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Entry
FCOL_10185 CDS
T01653
Symbol
aspS
Name
(GenBank) aspartyl-tRNA synthetase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
fco
Flavobacterium columnare
Pathway
fco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCOL_10185 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fco01007
]
FCOL_10185 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fco03016
]
FCOL_10185 (aspS)
03029 Mitochondrial biogenesis [BR:
fco03029
]
FCOL_10185 (aspS)
Enzymes [BR:
fco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FCOL_10185 (aspS)
Amino acid related enzymes [BR:
fco01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FCOL_10185 (aspS)
Transfer RNA biogenesis [BR:
fco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FCOL_10185 (aspS)
Prokaryotic type
Other AARSs
FCOL_10185 (aspS)
Mitochondrial biogenesis [BR:
fco03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FCOL_10185 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2d
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AEW86846
UniProt:
G8X530
LinkDB
All DBs
Position
2394458..2396209
Genome browser
AA seq
583 aa
AA seq
DB search
MFRSHTCGELNASHINTEVTLAGWVQKSRDKGFMIWVDLRDRYGITQLIFDESRTDKKVM
ELAKTLGREFVVQVKGTVIERESKNSNIPTGDIEILVKELIVLNQAQLPPFTIEDETDGG
EELRMKYRYLDIRRNPVKNSLLFRHRVAMEVRNYLSNQGFCEVETPYLIKSTPEGARDFV
VPSRMNPGQFYALPQSPQTFKQLLMVGGMDKYFQIVKCFRDEDLRADRQPEFTQIDCEMA
FVEQEDILNMFEGLTRHLLKEVKGIEVDKFPRITYDYAMKTYGNDKPDIRFGMKFGELNT
VAQHKEFGVFNSAELVVGIAVPGGASFTRKEIDAWIEWVKRPQVGASGMVYCKCETDGSF
KSSVDKFYDQEDLKKWAEITNANAGDIIFVLSGPAYKTRTQLSALRMELANQMGLRKPNE
FAPLWVVDFPLLEWDEESGRYHAMHHPFTSPKPEDVHLIGTEPGKIRANAYDMVLNGNEI
GGGSIRIHDKDLQAKMFELLGFSKEEAENQFGFLMNAFQYGAPPHGGLAFGLDRLVAILG
GQETIRDFIAFPKNNSGRDVMIDAPSVLDLKQLNELFIASITE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaagtcatacttgtggcgaattaaatgcgtcacatatcaatacagaagttacc
cttgcaggatgggttcagaaatctcgagataaaggttttatgatatgggttgatttacgt
gatcgttacggaattactcagctcatttttgacgaaagtcgtacggataaaaaggtaatg
gaattagctaaaactttaggtcgtgaatttgtggttcaagtgaaaggaactgtaatagaa
cgcgagtctaaaaattcgaatatacctacgggggatatagaaatcttagtaaaagagcta
attgttttaaatcaagcacaattaccaccttttacaattgaggacgagacagatggagga
gaagaattgcgtatgaaatatcgttatttggatattcgtcgtaatccagtaaaaaatagt
ttactattccgtcatcgcgtggctatggaagtaagaaattatctttctaatcaaggcttt
tgcgaggtagaaacaccttatttaataaagtcaactccagaaggagctagagactttgtg
gtgccttcacgtatgaatccagggcaattttatgcgttgccacaatcgccacaaacattc
aaacaattgttgatggtaggaggtatggataaatattttcaaattgtaaaatgtttccgt
gatgaggatttgcgtgctgatcgtcaacctgagtttactcaaattgattgtgaaatggcg
tttgttgaacaagaggatattttaaatatgttcgaaggcttaacacgtcatttgttaaaa
gaagtaaaaggaatagaagtagataaatttcctagaattacttatgattatgcgatgaaa
acctatggtaatgataaaccagatattcgttttgggatgaagtttggagagttaaatacg
gtggcgcaacataaagaatttggtgtttttaattcagctgagttagtagtaggtattgca
gtgccagggggagcttcttttactcgtaaggaaattgatgcttggattgaatgggtaaaa
cgcccacaagtaggagcttcgggaatggtatactgtaaatgcgaaacagatggttctttc
aaatcatccgtagataaattttacgatcaagaagacttaaagaaatgggcagagataact
aatgctaatgcaggagatattatctttgttttatctgggccagcttataaaacacgtaca
caattaagtgctttacgtatggagttagctaaccaaatgggattacgtaaacccaatgag
tttgctccattatgggtggttgattttcctttattagaatgggatgaagaaagtggtcgt
taccatgcaatgcaccatccatttacatcgccaaagccagaggatgttcatttaatagga
acagaacctgggaaaattagagccaatgcttatgatatggtcctaaacggaaatgaaatt
ggaggaggttcaatacgtattcatgataaagacttgcaagcaaaaatgtttgagcttctt
ggattttcaaaagaagaagcagaaaatcaatttggattcttaatgaatgcctttcaatat
ggcgcaccaccacacggagggttggcttttggattggatcgcttagtggctattctagga
ggtcaagaaaccattcgtgactttattgcttttcctaaaaataattcaggtagagatgtt
atgattgatgccccttcagttttagatttgaaacaattaaacgaactgtttattgcttcg
ataactgaataa
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