Flavobacterium columnare: FCOL_10275
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Entry
FCOL_10275 CDS
T01653
Name
(GenBank) dCMP deaminase
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
fco
Flavobacterium columnare
Pathway
fco00240
Pyrimidine metabolism
fco01100
Metabolic pathways
fco01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FCOL_10275
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
fco02044
]
FCOL_10275
Enzymes [BR:
fco01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
FCOL_10275
Secretion system [BR:
fco02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
FCOL_10275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
SNAD4
APOBEC_N
APOBEC4_like
NAD1
APOBEC2
APOBEC3
APOBEC1
APOBEC4
zf-RING_15
NAD2
AID
Motif
Other DBs
NCBI-ProteinID:
AEW86862
UniProt:
G8X5L8
LinkDB
All DBs
Position
complement(2412220..2412651)
Genome browser
AA seq
143 aa
AA seq
DB search
MEEKLSKYDTAYLRLAKEWGKLSYCKRKQVGAIIVRDRMIISDGYNGTPSGFDNCCEDEN
NLTHWYVLHAEANAILKVASSTQSCNQATLYITLSPCKECSKLIHQAGIRRVVYLEKYKD
DSGLVFLEKAGVVVQQIKDLDSE
NT seq
432 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaaacttagcaaatacgacaccgcctacctacgtttagcaaaagaatggggc
aaactctcttattgcaaaagaaaacaagtaggagcaattatagttcgagatcgaatgatt
atatcagacgggtataatggcactccttctggatttgacaattgttgcgaagacgaaaac
aacctaacgcattggtacgtccttcacgcagaagctaatgcaatactaaaggttgccagc
tctacacaatcatgcaatcaagcaactctttacattaccctttctccttgcaaagagtgc
tctaaattaatccaccaagcaggaataagaagagtcgtttatctcgaaaaatacaaagat
gattcaggtttggtttttttagaaaaagctggggttgttgtacaacaaattaaagattta
gattcagaatag
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