Flavobacterium columnare: FCOL_10525
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Entry
FCOL_10525 CDS
T01653
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fco
Flavobacterium columnare
Pathway
fco00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FCOL_10525 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fco01007
]
FCOL_10525 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fco03016
]
FCOL_10525 (lysS)
Enzymes [BR:
fco01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
FCOL_10525 (lysS)
Amino acid related enzymes [BR:
fco01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FCOL_10525 (lysS)
Transfer RNA biogenesis [BR:
fco03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FCOL_10525 (lysS)
Prokaryotic type
Other AARSs
FCOL_10525 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Rho_N
Motif
Other DBs
NCBI-ProteinID:
AEW86912
UniProt:
G8X5R8
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All DBs
Position
2487836..2489527
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AA seq
563 aa
AA seq
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MQLSEQEIIRREKLTKLRELGINPYPANLYPVDHTSKQIKESFEEGKKVVVAGRLMSNRD
QGKACFSEIQDSEGRIQAYFNRDIICSGEDKTLYNTVFRKLVDLGDFIGIEGELFTTQVG
AQCIRVTNFTFLSKTLRPLPMPKTDETGKVFDEFIDPELRYRMRYVDLVVNPQVKEVFVK
RTKLFTAMRTFFNNAGYMEVETPVLQSIPGGAAARPFITHHNSLDIPLYMRIANELYLKR
LIVGGFDGVYEFSKNFRNEGMDRTHNPEFTAMEIYVAYKDYNWMMAFTENLLEYCALQVN
GTTEATFGEHKVNFKAPYARVTMTDAIKQFTGFDITGKTEEELREAAKSMGIEVNDTMGK
GKLIDEIFGEKCEGNFIQPTFITDYPKEMSPLTKEHRDNPDLTERFELMVCGKEIANAYS
ELNDPIDQRERFVAQMELAQKGDDEANGIIDEDFLRALEYGMPPTSGLGIGMDRLIMFLT
NNASIQEVLFFPQMRPEVKPLAISDDAKTIVELLKVEDNQTLALLKEKSGLSGKKWDASM
KELTKAGLTKVVVEGESKTVVLL
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgcaactttcagaacaagaaatcatcagaagagaaaagttgaccaagttacgtgaactt
ggtatcaatccgtatcccgctaatttgtatccagtagatcatacttcgaaacaaataaag
gaatcttttgaagaaggtaagaaggttgtagtagcgggtcgtttgatgagtaaccgcgac
caaggaaaagcttgttttagtgaaattcaagatagcgaaggacgtattcaagcatatttt
aaccgagatattatttgctctggagaggataaaaccttatacaatacagtttttagaaag
ttagtggatttaggcgattttataggaatagaaggtgaattatttactacacaagtaggc
gcacaatgtattcgtgtaacgaactttacttttttaagtaaaacgttacgtcctttacca
atgcctaaaacagacgaaacaggtaaggtttttgacgaattcatagatcctgaactacgt
taccgtatgcgttatgtggatttggtagtaaatccacaagtaaaagaggtatttgtaaaa
agaacgaaactctttactgccatgcgtacattttttaacaacgctggttacatggaagta
gaaacacctgttttacagtctatccccggaggagcggcagcacgcccatttattacacat
cacaatagtttagatatccctttatatatgcgtattgctaatgagttgtatttaaagcga
ttaattgtaggtggatttgacggcgtatatgagttttctaaaaacttccgcaatgaaggt
atggacaggactcataatccagaatttaccgctatggaaatttatgtagcgtataaagac
tacaactggatgatggcgtttactgaaaatttattagaatactgtgcattacaagttaat
ggtactacggaagctacttttggtgaacataaagtaaatttcaaggctccttacgctcgt
gttacgatgactgacgcgatcaaacaatttacaggttttgatataacgggtaagactgaa
gaagaattacgtgaagcagcaaaatctatgggcattgaggtaaatgacaccatgggtaaa
ggaaaattaattgatgaaatatttggcgaaaaatgtgaaggtaatttcattcaaccaact
tttattacggattatccaaaagagatgtctcctttaactaaagaacaccgcgataatcct
gatttaacggaacgttttgagttaatggtttgtggaaaagaaatagccaatgcttattca
gaactaaacgatcctattgaccagcgagaacgttttgtcgcgcaaatggagttagcccaa
aaaggagatgatgaagccaatggaattattgatgaagattttttacgagctttagaatat
ggaatgcctcctacttcgggattaggtataggtatggatcgtttaattatgttcttaacc
aataatgcgtctattcaggaggtattattcttccctcaaatgcgtccagaagtaaagcca
ttagctataagtgatgatgcaaagactatcgttgaattactaaaagttgaagacaatcaa
actttagctcttttaaaagaaaaatcaggcttgagtggcaaaaaatgggatgcttcgatg
aaagaattaacaaaagcgggcttgacgaaagtagtcgttgagggcgaaagtaaaacggtt
gttcttttataa
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