Flavobacterium columnare: FCOL_11645
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Entry
FCOL_11645 CDS
T01653
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
fco
Flavobacterium columnare
Brite
KEGG Orthology (KO) [BR:
fco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fco03016
]
FCOL_11645
Enzymes [BR:
fco01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
FCOL_11645
Transfer RNA biogenesis [BR:
fco03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
FCOL_11645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AEW87130
UniProt:
G8X816
LinkDB
All DBs
Position
2762015..2763466
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AA seq
483 aa
AA seq
DB search
MEKVIDENRQGTSLILEQNQKNTKKMFIESYGCQMNFSDSEIVASILTEQGYNTTQNLQE
ADLVLVNTCSIRDKAEQTVRKRLEQYNAIKKVNPTMKVGVLGCMAERLKEKFLEEEKIVD
LVVGPDAYKDIPNLLSEVEEGRDAINVILSKEETYGDIQPVRLNSNGVNAFVSITRGCDN
MCTFCVVPFTRGRERSREPQSIIEEIQDLWNKGYKEVTLLGQNVDSYLWYGGGLKKDFIK
ASEMQKATAVDFSQLLDLCATKFPKMRFRFSTSNPQDMHLEVIETMAKHHNICKYIHLPV
QSGSTRILKEMNRQHTREEYLELVDKIYQIIPDISLSQDMIAGFPTETEEDHKDTLSLMA
HCKYDFGFMFAYSERPGTLAARKMEDDIPEEVKKRRLNEIIDLQQKLGLQRTQRFIGQTV
EVLVEKDSKRSDQHWSGRNSQNTVVVFPKENYKPGDFVLVKVTDCTAATLIGEAVGYSDI
MQN
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggtaattgacgaaaatagacaaggaacaagcttgattttagaacagaatcag
aagaatacaaaaaagatgttcatagaaagttatggatgtcagatgaacttttcagatagt
gagattgtagcttctatcttaacagaacaaggttacaacacgacacaaaatcttcaagaa
gctgatttagttttagtaaatacttgctcgattagagacaaagctgagcaaaccgttcgt
aaacgtttagaacaatacaatgcaataaaaaaagtaaaccctactatgaaagtaggtgtt
ctaggttgtatggcagaacgtctaaaagaaaaatttctagaagaagaaaagattgtagat
cttgttgtaggacctgatgcttataaagacattcctaatttattaagtgaagtggaagaa
ggtcgtgatgctattaatgttattctttctaaagaagaaacgtatggagacattcaacct
gttcgtttaaatagtaatggtgtgaatgcgtttgtatctattacaagagggtgtgacaat
atgtgtaccttttgtgtagtccctttcacccgtggtcgtgaacgtagccgtgaaccacaa
agtatcatagaggaaattcaagatttatggaataaaggatataaagaagtcaccttatta
ggtcaaaatgttgacagctatctttggtacggtggagggcttaaaaaagacttcataaaa
gcaagtgaaatgcaaaaagcaactgctgtagatttttctcaattattggatctatgcgca
actaagttccctaaaatgcgttttcgcttttctacttctaatccgcaagatatgcacctc
gaagtaattgaaacgatggccaaacaccacaatatatgtaagtacattcacttacctgta
caatcaggaagtacacgtatattaaaggagatgaatcgtcaacatacgcgtgaagaatac
ctagaacttgtagacaaaatttatcaaatcatccctgacatttcattatcacaagatatg
atagcaggttttccaactgaaacagaggaagaccacaaagacacactaagtttaatggca
cattgcaagtacgactttggctttatgtttgcctattctgaaagacctggaactttagct
gctcgaaaaatggaagatgatattcctgaggaagttaaaaaacgtcgtttaaatgaaatc
attgatttacaacaaaaattaggattacaacgtacccagcgtttcataggtcaaactgta
gaagttttagtcgaaaaagattctaaacgttctgatcaacattggagtggaagaaattca
caaaacaccgtagttgtattccctaaagagaactacaaaccaggtgattttgtattggta
aaagtcacggattgcactgccgctacattaataggtgaagcggtaggctattcagatatt
atgcagaattaa
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